Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_14070 |
Symbol | |
ID | 8633043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1582365 |
End bp | 1584533 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | predicted acyltransferase |
Protein accession | YP_003314179 |
Protein GI | 269794724 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.276314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.99262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGCG CCCTCTCGCG TCCTGCCCCC GACGCAGCAC CGGCCGGTCC CTCCGTGCGT CGCCCGACGG CGATCGTCCC CGAGATCCAG GCCCTACGCG CCCTCGCCGT CGCCGGTGTG GTGGTCTACC ACCTCTGGCC GTCGGTGCTG CCCGCAGGGT TCGTGGGTGT CGACGTGTTC TTCGTGATCT CCGGGTACCT CATCACCTCG CACATGATCG GCGAGGTCGA GCGCACCGGG CGCCTCGGGC TCGCCCGGTT CTACGCCCGC CGAGCCCGCC GGATCCTGCC TGCCGCGACG CTCGTGGTCG TCACCACGGC GCTCGCCGCG GTCGCGCTGC TGCCCGAGCT CCGCTGGGCC GAGGTGACGC GGCAGGGCAC GGCGTCGCTG CTCTGGGTGC AGAACTGGCT GCTCGCGTCG GACTCCGTCG ACTACCTCGC CGAGGGTGCG GCGCCGAGCC CGTTCCAGCA CTTCTGGTCG CTGTCGATCG AGGAGCAGTT CTACGTCCTG TGGCCCGTGG CGCTCGTCCT GCTCCTGTGG GCGCGCTCGC GCCGCGGTGC ACGACGACGC GCCGAGGCAG CCCCCAGCGG TGCCGCGGGT GCTCGCAGGT CTGCGCTCGT CCTCGTCCTG GTGCTCACCC TGGTCTCCTT CGTCTGCTCG GTGGTGGTCA CCGCGAGCGG CGACCCGGCG GCGTACTTCG TCAGCCACAC GCGGTTCTGG GAGCTCGGGG TGGGTGCGCT GCTCGCCCTG AGTGCGCTGC GCACGTCCGA CGCGCGGGTA CGTGCCGCGA CTGCGTGGCT CGGGCTGGTG CTCATCGCCG GCGGCATGGT CCTCGTGCCG CTCGACGGGT TCCCGGGAGC GCTCGCTCTC GTCCCGACCG TCGGTGCGGC CCTGGTGATC CTCGCGGCAC GTTCTGGCGG CACACCGACG GTCCGCAGGC TGAGCTCCGG CAGGGCGGTG CTCTGGCTGG GCGACGTCTC GTACTCCCTC TACCTGTGGC ACTGGCCGGT GCTCGTCCTC GCGCCCTTCG CGGTCGCCCG CGTCTCCGGT GCGACCTCGG TGGCCGAGGC CTCCACGACG GTGCTCGTCG GTGTCCTGGG TGCCTCGCTG CTGCTGGCCG GCCTCACGCG ACGCGTCGTC GAGGTGCCCT TCCACCGCGG TCTGCGCCCG GGTGCGAGCG CACGGGCGGT TCTCGTCGCC GCCGCGGTGC TGCTCGTCGT CAGCGTCGTC GTGGTGCAGG TGCCCGGGCG GACCGCCGAG GCTCGGGCCG ACGACCGTGC CGCCGGTGCG CAGGCACTGC TCGCGGAGGC CCCGGACGCC CTCGGCGCAG GCTCCCTGAC CACCGTCGGT ATCAACACCT TCGCGTCCAC CAGCCGCACG ATCGTCCCTG CACCCGAGAA CCCCCGTGAG GAGCTCCCCG AGGGCGCTGA AGGGCGCTGC AAGGCCTCAC GCGACGGGGA GGAGGTGGCG CCGCGCTGCG AGTTCGGTCC CGCGGACGCC GAGCGCGTCG TCGCGCTGGT CGGAGACTCG CACGCCGAGC AGTACCTGCC CACGCTCCAG GCGGTGGCCG CGGAGCACGA CGTCCGGGTC ATCACCTACC TGCGCAGCAG CTGCCCGTAC TCGACGGCGC AGCCGACCTC GGACGCGGAG CGCGGCGGAC TCTGCGTCCG GTCGAACGAC GCGACCACCG AGGCGATGCT CGCCGATCCG AGCATCGACG TGGTCGTCAC CTCGAACCGG ACCGACGTCG ACTTCGTCGC GACCGACAGC GTCGCCTCGC CCGTCGACGG TCTCGTGGAG GCCTGGACGC GGCTCTCCGA GGCCGGGCTG CCCGTCGTGG TGCTGTCCGA CAACCCGCAG ATGCTCCCCG AGGACGCCAC CACCGAGTGC GTGGTCACGC ACGCCGTCGA CCCGTCGGTC TGCGCGCGGA CCGCTGCGGA CGCCCTCCCG CTCGACCACC AGGTCGCTGC GGCGGCCGAG ACCGACGTGA CGTTCGTGGA CACCGAGCCG TGGTTCTGCG CGGAGGGCTC CTGCCCACCC GTCATCGGCA GCGTCCTCGT CTACCGCGAC TACCACCACA TCACCCCCGC CTACGCCCGC ACCCTCGCCC CGCTCCTCTG GGACGCGATG GCTGGCGTCG TGGGTGACAG CCCGGACGAG GAAGGCTAG
|
Protein sequence | MTSALSRPAP DAAPAGPSVR RPTAIVPEIQ ALRALAVAGV VVYHLWPSVL PAGFVGVDVF FVISGYLITS HMIGEVERTG RLGLARFYAR RARRILPAAT LVVVTTALAA VALLPELRWA EVTRQGTASL LWVQNWLLAS DSVDYLAEGA APSPFQHFWS LSIEEQFYVL WPVALVLLLW ARSRRGARRR AEAAPSGAAG ARRSALVLVL VLTLVSFVCS VVVTASGDPA AYFVSHTRFW ELGVGALLAL SALRTSDARV RAATAWLGLV LIAGGMVLVP LDGFPGALAL VPTVGAALVI LAARSGGTPT VRRLSSGRAV LWLGDVSYSL YLWHWPVLVL APFAVARVSG ATSVAEASTT VLVGVLGASL LLAGLTRRVV EVPFHRGLRP GASARAVLVA AAVLLVVSVV VVQVPGRTAE ARADDRAAGA QALLAEAPDA LGAGSLTTVG INTFASTSRT IVPAPENPRE ELPEGAEGRC KASRDGEEVA PRCEFGPADA ERVVALVGDS HAEQYLPTLQ AVAAEHDVRV ITYLRSSCPY STAQPTSDAE RGGLCVRSND ATTEAMLADP SIDVVVTSNR TDVDFVATDS VASPVDGLVE AWTRLSEAGL PVVVLSDNPQ MLPEDATTEC VVTHAVDPSV CARTAADALP LDHQVAAAAE TDVTFVDTEP WFCAEGSCPP VIGSVLVYRD YHHITPAYAR TLAPLLWDAM AGVVGDSPDE EG
|
| |