Gene Sked_13340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13340 
Symbol 
ID8632970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1500576 
End bp1502246 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSSS sodium solute transporter 
Protein accessionYP_003314108 
Protein GI269794653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0683463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0921974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CCGTCTCCGC CGCAGGCACG GCCGACCAGG GCTACGTGCT CGCCGCCTCC 
GAGGACATCG GCAACCCGGT CGTCAACATC GGCATCTTCC TCGCCTTCGT GGCGGTCACC
CTCGTGGTGG TGCTGCGGGC CTCGCGGACC AACAAGACCG CCGAGGACTA CTACGCCGGC
GGGCGCTCCT TCACCGGTCC GCAGAACGGC ACCGCGATCG CGGGGGACTA CCTGTCGGCC
GCGAGCTTCC TCGGCATCGT CGGGGCCATC GCGATCAACG GCTACGACGG GTTCCTCTAC
TCCATCGGGT TCCTCGTCGC GTGGCTCGTC GCGCTGCTGC TCGTCGCCGA GCTGCTCCGC
AACACCGGCA AGTTCACGAT GGCCGACGTC CTGTCCTTCC GGCTCAAGCA GCGCCCCGTC
CGCATGGCCG CAGCCCTGAC GACGCTCGCA GTCGTGTTCT TCTACCTGCT CGCCCAGATG
GCCGGCGCCG GGGGACTGGT CGCGCTGCTG CTGGGCATCG ACAGCTCCGG CGGACAGGCC
GTCGTCATCG CCGTGGTCGG TGCGCTGATG ATCCTCTACG TGCTCATCGG CGGGATGAAG
GGCACCACCT GGGTGCAGAT CATCAAGGCC ATCCTGCTCA TCGCCGGCGC CGGGATCATG
ACCGTGTGGG TGCTCGCCAA GTTCGGCTTC AACCTCTCCG ACGTGATCCA GGGCGCCATC
GACACCTCCG GCATCGCCGG CCTGGCCGAG CCCGGCGCGC AGTACGGCGG CAGCGAGACG
AGCAAGCTGA ACTTCCTGTC GCTCGCCCTG GCCCTCGTGC TCGGCACGGC GGGCCTGCCG
CACGTGCTCA TGCGCTTCTA CACGGTGCCC ACCGCCAAGG AGGCCCGCCG GTCCGTGGTC
TGGGCCATCT GGCTCATCGG CATCTTCTAC CTCTTCACCC TCGTCCTCGG CTACGGGGCC
GGGGCGCTCG TTGGCGCCGA CACGATCAAC GCCGCACCGG GTGGCGTGAA CTCGGCCGCG
CCGCTGCTGG CCTTCGCCCT CGGCGGCGAG ATCCTGCTCG GGCTCATCTC CGCGGTGGCC
TTCGCGACCA TCCTCGCGGT GGTCGCCGGG CTCACCATCA CCGCGGCGGC GAGCTTCGCG
CACGACATCT ACGCCTCCGT CATCAAGAAG GGCGAGGTGA ACCCGGACGG CGAGGTCAAG
GTCGCCCGGA TGACCGTCGT GGTCATCGGG CTGCTGGCGA TCGTCGGCGG CATCTTCGCC
AACGGCCAGA ACGTCGCTTT CCTCGTGGCC CTGGCCTTCG CCGTCGCGGC GAGCGCCAAC
CTGCCGACCA TCATCTACTC GCTGTTCTGG AAGCGCTTCA ACACCCGGGG AGCGCTGTGG
AGCATGTACG GCGGCCTCGC GTCGTGCCTC GTGCTCATCA CCTTCTCGCC CGTCGTCTCG
GGCAAGACGG ACGACGCCGG CAACAGCCTG TCGATGATCC GCGACACCGG CATCGACTTC
GCGTGGTTCC CGCTCGAGAA CCCCGGCATC GTCACCATCC CGCTCGGGTT CCTGCTCGGC
ATCGTCGGCA CCCTCACCAG CCGCGAGAAG GGAGACAAGG CCAAGTACGC CGAGATGGAG
GTGCGCTCCC TCACAGGCGC CGGCTCCGAG AAGGCCGCCA CCAACCACTA G
 
Protein sequence
MTGTVSAAGT ADQGYVLAAS EDIGNPVVNI GIFLAFVAVT LVVVLRASRT NKTAEDYYAG 
GRSFTGPQNG TAIAGDYLSA ASFLGIVGAI AINGYDGFLY SIGFLVAWLV ALLLVAELLR
NTGKFTMADV LSFRLKQRPV RMAAALTTLA VVFFYLLAQM AGAGGLVALL LGIDSSGGQA
VVIAVVGALM ILYVLIGGMK GTTWVQIIKA ILLIAGAGIM TVWVLAKFGF NLSDVIQGAI
DTSGIAGLAE PGAQYGGSET SKLNFLSLAL ALVLGTAGLP HVLMRFYTVP TAKEARRSVV
WAIWLIGIFY LFTLVLGYGA GALVGADTIN AAPGGVNSAA PLLAFALGGE ILLGLISAVA
FATILAVVAG LTITAAASFA HDIYASVIKK GEVNPDGEVK VARMTVVVIG LLAIVGGIFA
NGQNVAFLVA LAFAVAASAN LPTIIYSLFW KRFNTRGALW SMYGGLASCL VLITFSPVVS
GKTDDAGNSL SMIRDTGIDF AWFPLENPGI VTIPLGFLLG IVGTLTSREK GDKAKYAEME
VRSLTGAGSE KAATNH