Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13340 |
Symbol | |
ID | 8632970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1500576 |
End bp | 1502246 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | SSS sodium solute transporter |
Protein accession | YP_003314108 |
Protein GI | 269794653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0683463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0921974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA CCGTCTCCGC CGCAGGCACG GCCGACCAGG GCTACGTGCT CGCCGCCTCC GAGGACATCG GCAACCCGGT CGTCAACATC GGCATCTTCC TCGCCTTCGT GGCGGTCACC CTCGTGGTGG TGCTGCGGGC CTCGCGGACC AACAAGACCG CCGAGGACTA CTACGCCGGC GGGCGCTCCT TCACCGGTCC GCAGAACGGC ACCGCGATCG CGGGGGACTA CCTGTCGGCC GCGAGCTTCC TCGGCATCGT CGGGGCCATC GCGATCAACG GCTACGACGG GTTCCTCTAC TCCATCGGGT TCCTCGTCGC GTGGCTCGTC GCGCTGCTGC TCGTCGCCGA GCTGCTCCGC AACACCGGCA AGTTCACGAT GGCCGACGTC CTGTCCTTCC GGCTCAAGCA GCGCCCCGTC CGCATGGCCG CAGCCCTGAC GACGCTCGCA GTCGTGTTCT TCTACCTGCT CGCCCAGATG GCCGGCGCCG GGGGACTGGT CGCGCTGCTG CTGGGCATCG ACAGCTCCGG CGGACAGGCC GTCGTCATCG CCGTGGTCGG TGCGCTGATG ATCCTCTACG TGCTCATCGG CGGGATGAAG GGCACCACCT GGGTGCAGAT CATCAAGGCC ATCCTGCTCA TCGCCGGCGC CGGGATCATG ACCGTGTGGG TGCTCGCCAA GTTCGGCTTC AACCTCTCCG ACGTGATCCA GGGCGCCATC GACACCTCCG GCATCGCCGG CCTGGCCGAG CCCGGCGCGC AGTACGGCGG CAGCGAGACG AGCAAGCTGA ACTTCCTGTC GCTCGCCCTG GCCCTCGTGC TCGGCACGGC GGGCCTGCCG CACGTGCTCA TGCGCTTCTA CACGGTGCCC ACCGCCAAGG AGGCCCGCCG GTCCGTGGTC TGGGCCATCT GGCTCATCGG CATCTTCTAC CTCTTCACCC TCGTCCTCGG CTACGGGGCC GGGGCGCTCG TTGGCGCCGA CACGATCAAC GCCGCACCGG GTGGCGTGAA CTCGGCCGCG CCGCTGCTGG CCTTCGCCCT CGGCGGCGAG ATCCTGCTCG GGCTCATCTC CGCGGTGGCC TTCGCGACCA TCCTCGCGGT GGTCGCCGGG CTCACCATCA CCGCGGCGGC GAGCTTCGCG CACGACATCT ACGCCTCCGT CATCAAGAAG GGCGAGGTGA ACCCGGACGG CGAGGTCAAG GTCGCCCGGA TGACCGTCGT GGTCATCGGG CTGCTGGCGA TCGTCGGCGG CATCTTCGCC AACGGCCAGA ACGTCGCTTT CCTCGTGGCC CTGGCCTTCG CCGTCGCGGC GAGCGCCAAC CTGCCGACCA TCATCTACTC GCTGTTCTGG AAGCGCTTCA ACACCCGGGG AGCGCTGTGG AGCATGTACG GCGGCCTCGC GTCGTGCCTC GTGCTCATCA CCTTCTCGCC CGTCGTCTCG GGCAAGACGG ACGACGCCGG CAACAGCCTG TCGATGATCC GCGACACCGG CATCGACTTC GCGTGGTTCC CGCTCGAGAA CCCCGGCATC GTCACCATCC CGCTCGGGTT CCTGCTCGGC ATCGTCGGCA CCCTCACCAG CCGCGAGAAG GGAGACAAGG CCAAGTACGC CGAGATGGAG GTGCGCTCCC TCACAGGCGC CGGCTCCGAG AAGGCCGCCA CCAACCACTA G
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Protein sequence | MTGTVSAAGT ADQGYVLAAS EDIGNPVVNI GIFLAFVAVT LVVVLRASRT NKTAEDYYAG GRSFTGPQNG TAIAGDYLSA ASFLGIVGAI AINGYDGFLY SIGFLVAWLV ALLLVAELLR NTGKFTMADV LSFRLKQRPV RMAAALTTLA VVFFYLLAQM AGAGGLVALL LGIDSSGGQA VVIAVVGALM ILYVLIGGMK GTTWVQIIKA ILLIAGAGIM TVWVLAKFGF NLSDVIQGAI DTSGIAGLAE PGAQYGGSET SKLNFLSLAL ALVLGTAGLP HVLMRFYTVP TAKEARRSVV WAIWLIGIFY LFTLVLGYGA GALVGADTIN AAPGGVNSAA PLLAFALGGE ILLGLISAVA FATILAVVAG LTITAAASFA HDIYASVIKK GEVNPDGEVK VARMTVVVIG LLAIVGGIFA NGQNVAFLVA LAFAVAASAN LPTIIYSLFW KRFNTRGALW SMYGGLASCL VLITFSPVVS GKTDDAGNSL SMIRDTGIDF AWFPLENPGI VTIPLGFLLG IVGTLTSREK GDKAKYAEME VRSLTGAGSE KAATNH
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