| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13060 |
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| Symbol | |
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| ID | 8632942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1465983 |
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| End bp | 1468541 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | DNA ligase D/DNA polymerase LigD |
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| Protein accession | YP_003314081 |
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| Protein GI | 269794626 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGACG ACGACACAGG GGCGCCCAGT CGCGCCGCTC AGCGCGAGAC AGTCACCGTC
GACGGGCACC GGGTGACGCT GACGAACCTG TCGAAGGTGA TCTACCCGGA GACCGGGACC
ACCAAGGCCG ACGTGCTGGC CTACCTGGCG GCCGTCGCGC AGCCCTTCGT GGCGCACGTG
ACCGGGCGCC CGGCGACCCG CAAGCGGTGG GTGCACGGCA CCGGCGGGCC GGTGTTCTTC
CAGAAGAACC TCGAGGACTC CGCCCCCACG TGGGTGCACC GGCGGGACAT CCAGCACTCC
GACCACGTCA ACACGTACCC GCTGGTCGAC GACCTCGCGA CGCTCACGTG GCTCGGTCAG
GTGGCGGCGC TCGAGATCCA CGTGCCGCAG TGGCGGTTCG GCCGGACCGG GGTCGAGCAC
CGGCCCGACC GCCTGGTGCT CGACCTCGAC CCCGGGCCCG GCACAGGGCT CGACGAGTGC
GTGCAGGTGG CGCTGTGGGC ACGGGAGATC CTCACCGGCA TGGACCTCGA GCCCTTCCCC
GTGACGAGCG GGTCCAAGGG GATCCACCTC TACGCGGCCC TGGACGGAGC GCACGACTCC
GACGCGGTGA GCGCCGTCGC GCACGAGCTG GCCCGTGCGC TCCAGGCCGA CCACCCCGAC
CTCGTGGTGT CCGACATGAA GAAGTCGCTG CGCGAGGGCA AGGTGCTCGT CGACTGGTCG
CAGAACAACC GCAACAAGAC GACCATCAGC CCGTACTCGC TGCGCGGCCG GGACCGCCCC
TACGTCGCCG CACCGCGCTC GTGGGCAGAG CTCGAGGCGG GCGGGCTCAC CCACCTCGAG
GCCGACGAGG TGGTCGCCCG GCTCGAGCGC GACGGTGACC TGCTCGCCCC GCTGCTCACG
GGCGGTCATG CCGCGCTCGA GCCGACCACT GCGCGGATGG CGGGCTTCGA GCGGACGGAC
CGGCTGGAGG TCTACCGGTC GAAGCGCGAT GCGTCGAAGA CCCCCGAGCC GGTCCCTGAG
GCCTCTCCGA CCGAGGCGTC CCCCGGCGAC GGGCCGGCCG GCTCTGCGGA CCCGGCCGCC
CCGACCTTCG TCATCCAGGA GCACCACGCC CGGGCTCTGC ACTACGACTT CCGGCTCGAG
CACGACGGCG TGCTCGTCAG CTGGGCTCTG CCCAAGGGCG AGCCGGTGGA CACGACGCAC
AACCGGCTCG GCGTCCAGAC GGAGGACCAC CCCCTCGAGT ACGGGAGCTT CGAGGGGACG
ATCCCGAGGG GCGAGTACGG CGCGGGCACC GTGTCGATCT GGGACCGCGG CACCTACGAC
CTGCACAAGT GGCGCGAGGG CGAAGAGGTC ATCGTCACGC TGCACAGTGA CGGCTCGGGC
GGCACAGACC GCGGGTCGCG GCGCATCGCA CTCATCCACA CGGCGCACAC CGGGGGTGGG
ACGTCGTGGC TCGTGCACCG GATGAAGGAC GACGGGCACT CAGGCGGCGG GGCTGCAGGC
GCGTCGGGCG AGGAGGACGA CAAGGCGGAG GTCGCCGGGT CTGCGCCCGG GGAGGGCAGC
GCCTCGTCGT CCGGGTCGCG CGACCGCCCG CTCACCCCGA TGCTCGCGAC GCCGGGGACC
GTCGACGACC TCGACGAGGA CGACTGGGCC TTCGAGATGA AGTGGGACGG CATCCGCGCG
GTCGCCACCG TGGTGGCCGA CCGTGACGGC TCCCCCGGGT CGGTCCGGTT GACCAGCCGC
AACGGCAACG ACCTCACGGC GTCCTACCCC GAGCTCGCGG CCCTGTCCGG GTGCGTGGCC
GAGGACGTGG TGCTCGACGG TGAGATCGTC GCGCTCGACC AGGGTGGCCG CCCGAGCTTC
GGCCGGCTGC AGAGCCGGAT GAACCTCACG GCACGACGCG ACGTCGCCGC CGCGCAGAAG
GCTCAGGGTG TCGTGTACAT GGCCTTCGAC CTCGTCGAGC GGTCGGGGCG CCGGACCACG
CGGGTCGGCT ACGACGGCCG CCGGGCGGCT CTCGAGGAGC TCGTGACGGA GTCGGGGCCG
GTGCACGTAC CACCGGCCTT CACCTCCGAC GCGGCCTCGG CCCTCGCGGC CAGCAAGGAG
CTCGGGCTCG AGGGCATCGT CGCCAAGCGC CGGTCGAGCA CCTACCGCCC GGGCCGTCCG
GCGCACACCT GGGTCAAGGT CAAGCACGTG CAGACACAGG AGGTGGTGGT CGTCGGCTGG
CGCACCGGCA ATGGGGCGCG GGCCCAGACC CTCGGCTCCC TGCTGGTCGC CGTGCCCGAC
GCCACGGGGA CGCTGCGCTA CGCCGGACGC GTCGGCACCG GGTTCACCGA CGCGACGCTC
GAGCGTCTCG CGACCGAGCT GGCCCGGAAC CCCCGCCAGA CCCCTCCGGT CGACGACGTC
CCCGCGGCCG ACGCGGGCGA CGCGCACTGG GTCCGGGCCG ACCGGGTGGG CGAGGTCGCG
CACGCCGGGT GGACGGACCA GGGGCGGCTG CGCCACCCCG TGTGGCGCGG GTGGCGCAGC
GACAAGGCGC CGGGCGACGT GGTCCGCGAG GACGCCTGA
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| Protein sequence | MPDDDTGAPS RAAQRETVTV DGHRVTLTNL SKVIYPETGT TKADVLAYLA AVAQPFVAHV
TGRPATRKRW VHGTGGPVFF QKNLEDSAPT WVHRRDIQHS DHVNTYPLVD DLATLTWLGQ
VAALEIHVPQ WRFGRTGVEH RPDRLVLDLD PGPGTGLDEC VQVALWAREI LTGMDLEPFP
VTSGSKGIHL YAALDGAHDS DAVSAVAHEL ARALQADHPD LVVSDMKKSL REGKVLVDWS
QNNRNKTTIS PYSLRGRDRP YVAAPRSWAE LEAGGLTHLE ADEVVARLER DGDLLAPLLT
GGHAALEPTT ARMAGFERTD RLEVYRSKRD ASKTPEPVPE ASPTEASPGD GPAGSADPAA
PTFVIQEHHA RALHYDFRLE HDGVLVSWAL PKGEPVDTTH NRLGVQTEDH PLEYGSFEGT
IPRGEYGAGT VSIWDRGTYD LHKWREGEEV IVTLHSDGSG GTDRGSRRIA LIHTAHTGGG
TSWLVHRMKD DGHSGGGAAG ASGEEDDKAE VAGSAPGEGS ASSSGSRDRP LTPMLATPGT
VDDLDEDDWA FEMKWDGIRA VATVVADRDG SPGSVRLTSR NGNDLTASYP ELAALSGCVA
EDVVLDGEIV ALDQGGRPSF GRLQSRMNLT ARRDVAAAQK AQGVVYMAFD LVERSGRRTT
RVGYDGRRAA LEELVTESGP VHVPPAFTSD AASALAASKE LGLEGIVAKR RSSTYRPGRP
AHTWVKVKHV QTQEVVVVGW RTGNGARAQT LGSLLVAVPD ATGTLRYAGR VGTGFTDATL
ERLATELARN PRQTPPVDDV PAADAGDAHW VRADRVGEVA HAGWTDQGRL RHPVWRGWRS
DKAPGDVVRE DA
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