Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13030 |
Symbol | |
ID | 8632939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1462499 |
End bp | 1464109 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | spore coat assembly protein |
Protein accession | YP_003314078 |
Protein GI | 269794623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCT CTCAGATCCA GCCGACCAGC TCCGCAGGTC GCCCGGGACA GCCCTCGACC CGCCGCGCCG GCGCCCTCCC CTCCCGGTGG TACCGGGCGA CGGCGCTCGT CGTCGGGTCG GTGCTCGCGG TCGGGTCGCT CGCGGCCTGC GACACCTCGG GGACCGCGAG CGCGTCGTCG GTGACGGGGA CCACCTCGAC CGGTACCTGG GGCGACTCGT CGGTCCGGAC CGCGAGCGAC GTCGACGGCA CCGTCTGGGA CTCCTCGACC GTCCACACGA TCTCGGTCGA GGTCGACGAG GACGAGCTCG CCGCGATGAT CGAGACGTAC TCCGCGGAGG ACAGCAAGGA GTGGCTCACC GCGACGGTGA CCATCGACGG TCAGACCTTC GAGGACGTCG GGCTGCGCCT CAAGGGCAAC TCGTCGCTGC GGTCGGTCGG GACGGACACC GACGCCCAGG ACATCCCGTG GCTGATCCGC CTCGACAAGT TCGTCGACGG GCAGGAGCTC GACGGGTCGA CGGACTTCGT GGTCCGGTCG AACACCTCCG AGACCTCGCT CAACGAGGCG GTCGCCCTCG AGATGCTCGG GGCAGCAGGC CTCGCGACGG AGCAGGCGAT CGCGACGAGG TTCTCGGTCA ACGGCTCGGA GGAGGCGCTG CGCCTGACCA TCGAGGACCC GGACGACGCG TGGGACGCGG CGAGCTTCGA CACCGAGGGC ATCCTCTACA AGGCCCAGTC CGACGGCGAC TACAGCTACC GCGGCGACGA CCCGGCGTCG TACACGGACG TGTTCAGCCA GAAGAGCCCC TCGGGCGAGG ACGACCTCAC GCCTCTCATC GCGTTCTTGA AGTTCCTCGA CGAGTCGGAC GACGAGACCT TCGCGGCCGA GCTCGGCGAG CACCTCGACG TCGATGCCTT CGCGACGTAC CTCGCCATGC AGGACATCGT GGGGAACTTC GACGACATCG ACGGGCCGGG CAACAACTCG TTCCTGCGGT ACGACTCCGA GACGGGGGCG TTCACGGTGG TGAGCTGGGA CCTCAACCTG GCCTTCGGGC AGATGAACGG CGGCGGCATG CCGGGCGGGG CCGCAGGCGC GATGCCCGAG GGAGCCGCGG GTGCCGTACC GGACGGCGCA GACCTGCCCG AGGGGTTCAC TCCCCCGGAC GGGGCGACGG CACCCGACGG CGCCGGGCTG CCGGAGGGCA TGACCCCACC CGACGGCATG ACCCCGCCCG ACGGCACCGA CGCCGGTCAG CGCCCGGACC GCGGCGCAGG ACCCGGCACC GGGGCGGCCT CCACGGACGA CGGGACCACG GCGGACGAGG GCACCGCCGA GGCTGCCGAC GGCCAGCGCC CCGGCGGCGG CATGGGAGGC GGCATGGGCG GCGACAACAT CCTCGTCACC CGGTTCCTCG CCGACGACGA CTTCGCCGCC CTCGTCGACC AGGCGACCGC CGACCTCACG TCGTCCCTGG TCACGAGCGG GACGGCGCAG GAGATCCTCG ACCGGTGGAC CGCGCTGCTC ACCGACGAGG CGAGCGACCT CGTCGACCCG GCGACCATCA CGTCGGAGTC GGAGAGCATC GCAAGCGCTT TCCCGGCATA G
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Protein sequence | MPTSQIQPTS SAGRPGQPST RRAGALPSRW YRATALVVGS VLAVGSLAAC DTSGTASASS VTGTTSTGTW GDSSVRTASD VDGTVWDSST VHTISVEVDE DELAAMIETY SAEDSKEWLT ATVTIDGQTF EDVGLRLKGN SSLRSVGTDT DAQDIPWLIR LDKFVDGQEL DGSTDFVVRS NTSETSLNEA VALEMLGAAG LATEQAIATR FSVNGSEEAL RLTIEDPDDA WDAASFDTEG ILYKAQSDGD YSYRGDDPAS YTDVFSQKSP SGEDDLTPLI AFLKFLDESD DETFAAELGE HLDVDAFATY LAMQDIVGNF DDIDGPGNNS FLRYDSETGA FTVVSWDLNL AFGQMNGGGM PGGAAGAMPE GAAGAVPDGA DLPEGFTPPD GATAPDGAGL PEGMTPPDGM TPPDGTDAGQ RPDRGAGPGT GAASTDDGTT ADEGTAEAAD GQRPGGGMGG GMGGDNILVT RFLADDDFAA LVDQATADLT SSLVTSGTAQ EILDRWTALL TDEASDLVDP ATITSESESI ASAFPA
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