Gene Sked_13030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13030 
Symbol 
ID8632939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1462499 
End bp1464109 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content72% 
IMG OID 
Productspore coat assembly protein 
Protein accessionYP_003314078 
Protein GI269794623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCT CTCAGATCCA GCCGACCAGC TCCGCAGGTC GCCCGGGACA GCCCTCGACC 
CGCCGCGCCG GCGCCCTCCC CTCCCGGTGG TACCGGGCGA CGGCGCTCGT CGTCGGGTCG
GTGCTCGCGG TCGGGTCGCT CGCGGCCTGC GACACCTCGG GGACCGCGAG CGCGTCGTCG
GTGACGGGGA CCACCTCGAC CGGTACCTGG GGCGACTCGT CGGTCCGGAC CGCGAGCGAC
GTCGACGGCA CCGTCTGGGA CTCCTCGACC GTCCACACGA TCTCGGTCGA GGTCGACGAG
GACGAGCTCG CCGCGATGAT CGAGACGTAC TCCGCGGAGG ACAGCAAGGA GTGGCTCACC
GCGACGGTGA CCATCGACGG TCAGACCTTC GAGGACGTCG GGCTGCGCCT CAAGGGCAAC
TCGTCGCTGC GGTCGGTCGG GACGGACACC GACGCCCAGG ACATCCCGTG GCTGATCCGC
CTCGACAAGT TCGTCGACGG GCAGGAGCTC GACGGGTCGA CGGACTTCGT GGTCCGGTCG
AACACCTCCG AGACCTCGCT CAACGAGGCG GTCGCCCTCG AGATGCTCGG GGCAGCAGGC
CTCGCGACGG AGCAGGCGAT CGCGACGAGG TTCTCGGTCA ACGGCTCGGA GGAGGCGCTG
CGCCTGACCA TCGAGGACCC GGACGACGCG TGGGACGCGG CGAGCTTCGA CACCGAGGGC
ATCCTCTACA AGGCCCAGTC CGACGGCGAC TACAGCTACC GCGGCGACGA CCCGGCGTCG
TACACGGACG TGTTCAGCCA GAAGAGCCCC TCGGGCGAGG ACGACCTCAC GCCTCTCATC
GCGTTCTTGA AGTTCCTCGA CGAGTCGGAC GACGAGACCT TCGCGGCCGA GCTCGGCGAG
CACCTCGACG TCGATGCCTT CGCGACGTAC CTCGCCATGC AGGACATCGT GGGGAACTTC
GACGACATCG ACGGGCCGGG CAACAACTCG TTCCTGCGGT ACGACTCCGA GACGGGGGCG
TTCACGGTGG TGAGCTGGGA CCTCAACCTG GCCTTCGGGC AGATGAACGG CGGCGGCATG
CCGGGCGGGG CCGCAGGCGC GATGCCCGAG GGAGCCGCGG GTGCCGTACC GGACGGCGCA
GACCTGCCCG AGGGGTTCAC TCCCCCGGAC GGGGCGACGG CACCCGACGG CGCCGGGCTG
CCGGAGGGCA TGACCCCACC CGACGGCATG ACCCCGCCCG ACGGCACCGA CGCCGGTCAG
CGCCCGGACC GCGGCGCAGG ACCCGGCACC GGGGCGGCCT CCACGGACGA CGGGACCACG
GCGGACGAGG GCACCGCCGA GGCTGCCGAC GGCCAGCGCC CCGGCGGCGG CATGGGAGGC
GGCATGGGCG GCGACAACAT CCTCGTCACC CGGTTCCTCG CCGACGACGA CTTCGCCGCC
CTCGTCGACC AGGCGACCGC CGACCTCACG TCGTCCCTGG TCACGAGCGG GACGGCGCAG
GAGATCCTCG ACCGGTGGAC CGCGCTGCTC ACCGACGAGG CGAGCGACCT CGTCGACCCG
GCGACCATCA CGTCGGAGTC GGAGAGCATC GCAAGCGCTT TCCCGGCATA G
 
Protein sequence
MPTSQIQPTS SAGRPGQPST RRAGALPSRW YRATALVVGS VLAVGSLAAC DTSGTASASS 
VTGTTSTGTW GDSSVRTASD VDGTVWDSST VHTISVEVDE DELAAMIETY SAEDSKEWLT
ATVTIDGQTF EDVGLRLKGN SSLRSVGTDT DAQDIPWLIR LDKFVDGQEL DGSTDFVVRS
NTSETSLNEA VALEMLGAAG LATEQAIATR FSVNGSEEAL RLTIEDPDDA WDAASFDTEG
ILYKAQSDGD YSYRGDDPAS YTDVFSQKSP SGEDDLTPLI AFLKFLDESD DETFAAELGE
HLDVDAFATY LAMQDIVGNF DDIDGPGNNS FLRYDSETGA FTVVSWDLNL AFGQMNGGGM
PGGAAGAMPE GAAGAVPDGA DLPEGFTPPD GATAPDGAGL PEGMTPPDGM TPPDGTDAGQ
RPDRGAGPGT GAASTDDGTT ADEGTAEAAD GQRPGGGMGG GMGGDNILVT RFLADDDFAA
LVDQATADLT SSLVTSGTAQ EILDRWTALL TDEASDLVDP ATITSESESI ASAFPA