Gene Sked_12580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12580 
Symbol 
ID8632894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1428010 
End bp1429017 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314034 
Protein GI269794579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.616981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCA TGACCTCGAC GCCGACGCCA GGCCCCGCAG ACATCGCCCC CACGGCCCGC 
TCGGCGCGGT TCGGCACGGC ACTCGCGGTC GCGATCACGA GCGGAGCGGT GATCGCCGTG
CAGGGCAAGC TCAACGGAGA GCTCGCGACG CGCGGCGCCG GTGCGCTCGT CTCGTCGTGG
TTCGCCTACG TCGGTGCGTT CGTCATGGCC GTGCTGCTGC TCGCCGTGCT CGGCCGGCTC
GGTCCGGCGA TGCGCGCGCT GCGCCACGCG CGGTGGTGGT GGTTCGCGGT CGGGCTGTGC
AGCGTGCCCC TGGTGATGTC GATGGCTGTC GGGATCCCGG TCGTCGGTGT GGCGCTCGCG
TCGGTGTGCT CGGTCGCTGG CCAGACCGTG TCCGGGCTGG TGCTCGACTC GCGCGGGGTC
GGCCTCGACG CGCCGATCCG GTTGACGGTG CGGCGCGCGG TCGCCGGGCT CGGCGCCCTG
CTCGGGCTGG TCGTCGCGGT CCTGTCGAGC CCTGGCCCGA GCTCCGGGAC CGTCCTCGCG
GCCGTGGGCA CGGGGCTGTT CCTGTTCGTC GGCGGTCTGC TCCTCTCGGT GCAGTCGGCC
GGCAACGGCG TGGTCGCCGC GCGGACCGGC GACCCCCTGG TCCCGACGGT CGCCTCGGTG
GTGGGCGGGC TGCTCGGCAT CACGGTCGTG TGCGCGGTGG CCCTGGCTGT GGGCGGGCTG
TCGGAGGTGT CCCTGCCGCC GCTGAGCACC GACTGGTGGG TGTACCTCGG CGGGCCGCTC
GGCGCGATCA TCACCGTGTC GGCGGCCTAC TCCGTGCGGA CGCTCGGCAC CTTCGCCCTG
ACCCTGTCGA TCGTCGGAGG CCAGCTGGTC ATGGCGCTCG TCCTCGACAT CGGCGGGGGC
GTCGGTGCGA GCTGGTCGAC CATCGTGTCC GTGCTCATCA TCGCGGCCTC GGTGTCCCTG
ACGGTGACCA GGTCACGGTC GGCGGGGCAG GAGAGCACCA CGGCGTGA
 
Protein sequence
MGAMTSTPTP GPADIAPTAR SARFGTALAV AITSGAVIAV QGKLNGELAT RGAGALVSSW 
FAYVGAFVMA VLLLAVLGRL GPAMRALRHA RWWWFAVGLC SVPLVMSMAV GIPVVGVALA
SVCSVAGQTV SGLVLDSRGV GLDAPIRLTV RRAVAGLGAL LGLVVAVLSS PGPSSGTVLA
AVGTGLFLFV GGLLLSVQSA GNGVVAARTG DPLVPTVASV VGGLLGITVV CAVALAVGGL
SEVSLPPLST DWWVYLGGPL GAIITVSAAY SVRTLGTFAL TLSIVGGQLV MALVLDIGGG
VGASWSTIVS VLIIAASVSL TVTRSRSAGQ ESTTA