Gene Sked_12450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12450 
Symbol 
ID8632881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1418649 
End bp1419779 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content74% 
IMG OID 
Productacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase 
Protein accessionYP_003314021 
Protein GI269794566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGT CCGGGCTCGG CTGCGGACCG CACTACGGTG GTCCGATGAC TCACGACGTC 
GCCCTCGGGC CGATCCTCGA CGACCTGCGC ACCCTCGTGG AGGTCGAGTC GCCGTCCGGT
GACCCCGTCG CGCTCGCCGC GTCGGCCGAC GTGGTCGCCG ACCTCCTGGA GCGGCGCCTC
GGTGGCCTGG CCGTCCTCGT GGACGGTCCG GCCGGTCCGC ACGTCCACTG GTCGGGTGGC
GGCGAGCCGC GGGTGCTGGT GCTCGGGCAC CACGACACGG TGTTCCCGGC CGGCACGCTC
GCCCGACGGC CCTTCGCCGT CGCAGAAGGC AAGATCACCG GCCCGGGCGT CTTCGACATG
CTCGGCGGCC TGGTCCAGGC GATCCACGCG GTCGCGCTGC TCGACGACAG GTCTGGCGTC
GAGATCCTCG TGACGGCCGA CGAGGAGAAC GGCAGCGTCA CCTCACGAGC GCTGCTCGAA
GAGCGGGCGC TGGCCTGCGG CACGGTCCTC GTGATGGAGG GCGCCGCAGA CGGCGGCGAC
CTCAAGGTCG GCCGCAAGGG CTGTGGCACC TTCGAGGTCA CGGTCACCGG CCGCGCGGCG
CACGCCGGCC TCGAGCCCGA GGCGGGCGTC AACGCCCTCG TCGAGGCTGC GCACCAGGTG
CTCGCCATCG CCGCGTTGAA CCGTCCCGAG GTGGGGACGA CGGTCACCCC GACCGTCCTG
CACTCAGGTG GTCAGAGCAA CGTGGTGCCC GACGCGGCGA CCGTCGTCGT CGACGTCCGT
GTCGAGACGG CTGACGAGAA GGACCGTGTC GAGGCAGCCT TCGCGGCGCT CGTCCCGCTG
CACCCGGAGG CTGCGCTGAC GGTCGCGGGC TCCGTGAACC GCCCGCCGAT GACCCCCGAG
ACGTCGACAG ACCTCTTCGC GCTCGCGGCC TCGCTCGAGC CCGGGATCCG CGGTGTCTCG
GTCGGCGGAG GCAGCGACGG CAACTTCACC GCCGCCCTCG GCGTCCCCAC CCTCGACGGG
CTCGGCGCCG TCGGCGGGGG CGCGCACGCC GACACCGAGC ACGTGCTGGT CGACACCGTG
GTCGGACGTG TCCGACTGGT GGCAGGGCTC GTGCGGGCGA TCGTCGGCTG A
 
Protein sequence
MTASGLGCGP HYGGPMTHDV ALGPILDDLR TLVEVESPSG DPVALAASAD VVADLLERRL 
GGLAVLVDGP AGPHVHWSGG GEPRVLVLGH HDTVFPAGTL ARRPFAVAEG KITGPGVFDM
LGGLVQAIHA VALLDDRSGV EILVTADEEN GSVTSRALLE ERALACGTVL VMEGAADGGD
LKVGRKGCGT FEVTVTGRAA HAGLEPEAGV NALVEAAHQV LAIAALNRPE VGTTVTPTVL
HSGGQSNVVP DAATVVVDVR VETADEKDRV EAAFAALVPL HPEAALTVAG SVNRPPMTPE
TSTDLFALAA SLEPGIRGVS VGGGSDGNFT AALGVPTLDG LGAVGGGAHA DTEHVLVDTV
VGRVRLVAGL VRAIVG