| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_12210 |
|---|
| Symbol | |
|---|
| ID | 8632857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1400132 |
|---|
| End bp | 1401124 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
|---|
| Protein accession | YP_003313997 |
|---|
| Protein GI | 269794542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTC TCCGCTGGGC CCTCGGTCGG GTCGGGGCTG CCGCCCTCGT CGCCTGGGTC
GTCACCACCG TCGTGTTCTT CGCCCTCCGG GCGGCCGGCG GCGACCCGAC CGAGGCGATC
CTCGGCGGCC CCGGCTCGCA GGCCGGGGAG GAGGCCGTCG CGCAGGCGCG GGCCGACTAC
GGCCTCGACC GGCCGCTGAT CGTCCAGTAC CTGGTGCAGA TGCAGCGGAT CGTCACCTTC
CAGCTCGGCG ACTCCTACGC CCGACGGCAG CCGGTCGCCG ACCTCGTCGG CGCCCAGCTG
CCGTCGACCA TCCTGCTCGC GGTGCTCGCC CTCACCCTCG CCTGGGTGAT CGCCCTCGCA
GTCGCGACGC TCTCGACCCG CTCGCGCGGG CCGCTCGGGC GCGCGGCCTC CGGTGTCGCC
CAGGCCGGCG AGATCGTCGC CACGGTGGTC CCGCACTTCT GGCTCGGCGC GGTGCTCATC
CTCGTCTTCT CGTCGACCCT CGGCTGGTTC CCGGCCACGA GCGTCGGCGC CTCCCCCGCC
GGTCTCGTGC TGCCCGTCGT GACCCTCGCG ATCCCGACGG CCGGGTTCCT CGGACAGCTC
ATGCGTGACG GCCTCGACGA GGCCGCGGCG TCGCCCTTCG CCACGACGGC CCGCGCCCGC
GGTGCCTCCG AGTCGCGGGT CCTCTGGCGC CACACGCTGC GCCACGCCGC GTTGCCGGCG
ATCTCGCTGT CCGGGTGGGC CTTCGGCTCG CTGCTCAGCG GCGCGGTCGT CGTCGAGTCG
CTGTTCGGGC GCCCGGGCCT CGGGCGCCTT CTCCTCGACG CGACGTCCTC CCGGGACGTC
CCCGTGGTGG TCGGCACGGT GCTCGTCATC GCCCTCACCT ACACCGTCGT CATGACCGTC
GCCGACGGCG TCGAGCGCCT CGTCGACCCC CGCCCGCGCG GGACCGCCCG CACCGCCGAC
CGGTCAGCCG AGCCCGAGAA GGCGATCGTA TGA
|
|---|
| Protein sequence | MSVLRWALGR VGAAALVAWV VTTVVFFALR AAGGDPTEAI LGGPGSQAGE EAVAQARADY
GLDRPLIVQY LVQMQRIVTF QLGDSYARRQ PVADLVGAQL PSTILLAVLA LTLAWVIALA
VATLSTRSRG PLGRAASGVA QAGEIVATVV PHFWLGAVLI LVFSSTLGWF PATSVGASPA
GLVLPVVTLA IPTAGFLGQL MRDGLDEAAA SPFATTARAR GASESRVLWR HTLRHAALPA
ISLSGWAFGS LLSGAVVVES LFGRPGLGRL LLDATSSRDV PVVVGTVLVI ALTYTVVMTV
ADGVERLVDP RPRGTARTAD RSAEPEKAIV
|
|---|
| |