Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_11610 |
Symbol | |
ID | 8632797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1345287 |
End bp | 1346222 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | permease component of ABC-type sugar transporter |
Protein accession | YP_003313938 |
Protein GI | 269794483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.117578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.102082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC TCACCGCACC CGCCGGCTCG ACCGGTACCC GGACCAGCCC GCCGGGGAAG CGCCGCTCCG TCGGCCCGAC CCTCGCGCCC TACGCCTTCA TCGCACCGTT CTACCTGCTG TACGTGCTGT TCATGATCGT GCCGATCCTC GCTGCGATGG TCCTCAGCAC CACGCAGTGG GCCGGCCTCG GCTCGCCGAC CTTCGTCGGC CTGCGCAACT ACGCCGGGCT GCTCACGGAC ACGAGCTTCT GGACGGCGAT GGGCAACTCC GGCATCTACG TCCTCGTCAG CGTGCTCGTC GTCGTCCCGC TGTCGCTGCT CGTCGCGCAG GCGCTCAACG CCAAGGGGCT GCGAGGACGC GACCTCTTCC GCGTCACCTA CTTCATCCCG ATGGTCATCT CGCCGATCGT CATCTCGCTC ATCTTCTCGA TGATGCTCGA CACCGAGTTC GGGCTCGTCA ACACCCTGCT CCAGTCCGTC CTCGGCTTCG GCGGCGTCGA CTGGCTCGGC GACCCGACCT GGGCCAAGGT CTCGCTGAGC TTCGTCATGC TGTGGCGCTG GGTGGGGTAC CTCACCATCT TCTTCCTCGC CGGGCTGCAG GCCGTCCCGC GCGAGCTCTA CGAGGCGGCG GAGCTCGACG GCGCCGGGAC CGTCCGGAAG TTCACCACGG TGACGCTGCC CGCCATCCAG CCCGTCACCG CCTTCGTGGT GGTCACGTCC TTCATCAGCG CGGCGCAGAT CTTCGACGAG CCCTACCTGC TGACCCGCGG CGGCCCGGGG GAGTCGACGC TGTCCATCGC CATGTTCGTG TTCCGCGCCG CCTTCGAGCG CCAGCAGTTC GGCTACGCCG CGGCGGCCGG CATCGTCCTG TTCGTCGTCG TCTTCGCGGT GAGCCGGCTG CTCAACCGCG CCCTGAGCAT CGGGAAGGCA TCATGA
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Protein sequence | MTTLTAPAGS TGTRTSPPGK RRSVGPTLAP YAFIAPFYLL YVLFMIVPIL AAMVLSTTQW AGLGSPTFVG LRNYAGLLTD TSFWTAMGNS GIYVLVSVLV VVPLSLLVAQ ALNAKGLRGR DLFRVTYFIP MVISPIVISL IFSMMLDTEF GLVNTLLQSV LGFGGVDWLG DPTWAKVSLS FVMLWRWVGY LTIFFLAGLQ AVPRELYEAA ELDGAGTVRK FTTVTLPAIQ PVTAFVVVTS FISAAQIFDE PYLLTRGGPG ESTLSIAMFV FRAAFERQQF GYAAAAGIVL FVVVFAVSRL LNRALSIGKA S
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