Gene Sked_11610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11610 
Symbol 
ID8632797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1345287 
End bp1346222 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID 
Productpermease component of ABC-type sugar transporter 
Protein accessionYP_003313938 
Protein GI269794483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.117578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.102082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TCACCGCACC CGCCGGCTCG ACCGGTACCC GGACCAGCCC GCCGGGGAAG 
CGCCGCTCCG TCGGCCCGAC CCTCGCGCCC TACGCCTTCA TCGCACCGTT CTACCTGCTG
TACGTGCTGT TCATGATCGT GCCGATCCTC GCTGCGATGG TCCTCAGCAC CACGCAGTGG
GCCGGCCTCG GCTCGCCGAC CTTCGTCGGC CTGCGCAACT ACGCCGGGCT GCTCACGGAC
ACGAGCTTCT GGACGGCGAT GGGCAACTCC GGCATCTACG TCCTCGTCAG CGTGCTCGTC
GTCGTCCCGC TGTCGCTGCT CGTCGCGCAG GCGCTCAACG CCAAGGGGCT GCGAGGACGC
GACCTCTTCC GCGTCACCTA CTTCATCCCG ATGGTCATCT CGCCGATCGT CATCTCGCTC
ATCTTCTCGA TGATGCTCGA CACCGAGTTC GGGCTCGTCA ACACCCTGCT CCAGTCCGTC
CTCGGCTTCG GCGGCGTCGA CTGGCTCGGC GACCCGACCT GGGCCAAGGT CTCGCTGAGC
TTCGTCATGC TGTGGCGCTG GGTGGGGTAC CTCACCATCT TCTTCCTCGC CGGGCTGCAG
GCCGTCCCGC GCGAGCTCTA CGAGGCGGCG GAGCTCGACG GCGCCGGGAC CGTCCGGAAG
TTCACCACGG TGACGCTGCC CGCCATCCAG CCCGTCACCG CCTTCGTGGT GGTCACGTCC
TTCATCAGCG CGGCGCAGAT CTTCGACGAG CCCTACCTGC TGACCCGCGG CGGCCCGGGG
GAGTCGACGC TGTCCATCGC CATGTTCGTG TTCCGCGCCG CCTTCGAGCG CCAGCAGTTC
GGCTACGCCG CGGCGGCCGG CATCGTCCTG TTCGTCGTCG TCTTCGCGGT GAGCCGGCTG
CTCAACCGCG CCCTGAGCAT CGGGAAGGCA TCATGA
 
Protein sequence
MTTLTAPAGS TGTRTSPPGK RRSVGPTLAP YAFIAPFYLL YVLFMIVPIL AAMVLSTTQW 
AGLGSPTFVG LRNYAGLLTD TSFWTAMGNS GIYVLVSVLV VVPLSLLVAQ ALNAKGLRGR
DLFRVTYFIP MVISPIVISL IFSMMLDTEF GLVNTLLQSV LGFGGVDWLG DPTWAKVSLS
FVMLWRWVGY LTIFFLAGLQ AVPRELYEAA ELDGAGTVRK FTTVTLPAIQ PVTAFVVVTS
FISAAQIFDE PYLLTRGGPG ESTLSIAMFV FRAAFERQQF GYAAAAGIVL FVVVFAVSRL
LNRALSIGKA S