Gene Sked_11590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11590 
Symbol 
ID8632795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1342658 
End bp1343746 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313936 
Protein GI269794481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.042152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG ACCACGAGCC CGCGGCCGCA GCACCGCCGC CTGCCGAGCG CTCCCGCAGC 
ACCCGTCCTC CGTCGATGGT CGACGTCGCC CGCGCTGCCC AGGTGTCGCA GAAGACCGTC
TCCCGCGTCG TCAACCGTGA GCCCAACGTC AGCCCCGAGG TCCGCACCCG CGTCCTCGAG
GCGATCGCCA GCCTCGGCTT CCGTCCTAAC TCCGCGGCCC GCGCGCTGGT CACCAACCGC
ACCCGGACCA TCGGCATGGT GAGCATCGGC TCCTCCCTGC TCGGCCCTGC CTCGATCGTC
GACGGGGTCG AGAAGGCCGC ACGCGGCGCC GGCTACAGCC TCACGCTCGT GCGCACGGCC
TCGGGCGGTG CCGACGACAT CGGGGCAGCG ATGGACGCGC TCGTCGCCCA GGGCGTCGAG
GCGATCGTCA TCTCCGAGCC GGCGGACAGC CTCCAGCGCA TCGGGCACTC CGTCCCCGGC
ATCCCCGTCC TCGCCGTCGA GCACCGCGAG AACGAGGACG ACGACTGGAT CCTCGTCGGC
GCCGACACGT GGGGAGGTGC CCGCAGCGCC ACCGAGCACC TGCTCGGCCT CGGCCACCGG
ACCGTCTGGC ACGTGGCCGG GCCCGACGGG TGGGGGACCA GCGAGAACCG CGTCGACGGG
TGGCGCGCCG CGCTCCTCGA GTCCGGCTGC GCCGTCCCCG ACGTGGTCCG CGGCGACTGG
ACGGCGTCGT CCGGCTACGA GATCGGCTTG TCGCTGGCGA CCCGCGACGA CCTCACCGCC
GTCTTCGCGG CGAACGACGA CATGGCCGTC GGGCTCATCC ACGCCTTCGA GCGGTCCGGG
CTCAGCGTCC CTGACGACGT GAGCGTCGTC GGCTTCGACG ACATCGGCAC CGCAGGCTTC
CTGCACACCC CGCTCACCAC CGTGCGGCAG GACTTCGCGG AGATCGCCCG GCAGGGCATG
CGACGTCTGA TCGCCGCGAT CGAGGGACGG CACGTCGGCT CCCGCCAGGC CTCCGTCCCC
GTCCAGCTCA TCATCCGCGA GAGCACGGCC CGGGCAAACC CTCGGCGCCG CACCCTCACC
GGCCTCTGA
 
Protein sequence
MSADHEPAAA APPPAERSRS TRPPSMVDVA RAAQVSQKTV SRVVNREPNV SPEVRTRVLE 
AIASLGFRPN SAARALVTNR TRTIGMVSIG SSLLGPASIV DGVEKAARGA GYSLTLVRTA
SGGADDIGAA MDALVAQGVE AIVISEPADS LQRIGHSVPG IPVLAVEHRE NEDDDWILVG
ADTWGGARSA TEHLLGLGHR TVWHVAGPDG WGTSENRVDG WRAALLESGC AVPDVVRGDW
TASSGYEIGL SLATRDDLTA VFAANDDMAV GLIHAFERSG LSVPDDVSVV GFDDIGTAGF
LHTPLTTVRQ DFAEIARQGM RRLIAAIEGR HVGSRQASVP VQLIIRESTA RANPRRRTLT
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