Gene Sked_11570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11570 
Symbol 
ID8632793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1338813 
End bp1341170 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content74% 
IMG OID 
Productbeta-glucosidase-like glycosyl hydrolase 
Protein accessionYP_003313934 
Protein GI269794479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0110088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCACC AGGCCACCGC CCCGGCGCGG ATCCCGCTGC CGCAGGTCTC CGAGAGGGTC 
GCGCGGCTGC ACGCCCAGAT GACCCTCGAC GAGAAGCTCG CCCAGCTGGT CGGCTACTGG
GTGGACCAGG GCGGCGAGGT CGTCGCGCCC ATGCAGGGGG AGATGGCCAC CTCGGGCCAC
TACGAGGAGG CGACCGCGCA CGGGCTCGGG CACCTCACCC GGGTGTACGG CACCCGGCCG
GTCGACCCGG TCGAGCGCGC CGCGTGGCTC TGGGGAGAGC AGCGCCGGCT CGTCCGCGAG
ACACGGCTGG GCATCCCCGC GCTCGTCCAC GAGGAGTGCC TCACCGGTCT CGCCGCCTGG
AAGGCCGCGA CCTTCCCGAC ACCGCTCGCC TGGGGAGCGT CCTTCGACCC GGGCCTCGTC
GCGGAGATGG GCGCCGCGAT CGGTACCTCG ATGCGCACGC TCGGCATCCA CCAGGGGCTC
GCCCCCGTCC TCGACGTGAT CCGCGACCCC CGCTGGGGCC GGGTCGACGA GTGCATCGCC
GAGGACCCGT ACGTGGTCGG CACCATCGGC ACCGCCTACG TCCAGGGCCT CCAGTCCGAG
GGCGTGCACG CCACGCTCAA GCACTTCGTC GGGTACTCCG CCTCTCGTGC CGGCCGCAAC
CACGCCCCCG TCCACGCCGG TCCCCGGGAG ATCGCCGACG TGCTCCTGCC GCCCTTCGAG
ATGGCGGTGC TCGACGGCGG GGTGCGGTCG GTGATGAACT CCTACGCCGA GATCGACGGC
ATCCCCGTCG CCGCGGACCC CACCTATCTC ACGGGTGTGC TCCGCGACCT CTGGGGCTTC
GACGGCGTCG TGGTCTCCGA CTACTTCACC GTCGCGTTCC TCGAGGTCAT GCACGCGGTC
GCCGCCGACC GCGGCGAGGC GGCCTCCCTC GCGCTCGCGG CCGGCATCGA CGTCGAGCTG
CCCACCGGCG ACGCCTACAC CGGCCCGCTC GCCGAGAAGG TCCGTGCCGG GCTGGTCGAC
GAGGCGCTCG TCGACCGTGC CGTGCTGCGT GCCCTCGCGC AGAAGGAAGA GCTCGGTCTG
CTCGACGCCC GCTTCGACGA CGCGCCGCCG ACCGCGGTCG ACCTCGACCC CGCCGGGCAC
CGGGACGTCG CACGACGCCT CGCCGAGGAG TCCCTGGTGC TGCTGACCAA CGACGGGACA
CTGCCGCTCC TGCCAGGAGA CGGGCCGGCG CCCTCCCGCG TCGCCGTGAT CGGTCCGAAC
GCGGACCGGG CCGAGGCGCT CATGGGCTGC TACTCCTTCG CGAACCACGT GCTCGCGCAC
CACCCGGACC ACGAGATCGG CATCGAGATC CCGACGGTCG TCGAGGCGCT CCGCGACGAG
CTCCGCGGCG CAGCGCCGGG GACCGTCGTC GAGCACGCAC CCGGCTGCGC CGTCGAGGGC
GAGGACAGGT CGGGGTTCGA GGACGCCGCG GCGCTCGCGG CCCGCTCCGA CGTCGCCGTC
GTGGTGCTCG GCGACCAGGC CGGGCTCTTC GGCCGCGGCA CGGTGGGAGA GGGCAACGAC
GTCGAGTCCC TCGACCTGCC CGGGGTCCAG CGGGAGCTGG TCGAGGCGGT CGCCGCCACG
GGCACGCCGG TGGTCGTGGT GCTGCTCACC GGCCGGCCGT ACGCCGTGGA CTGGGCGGTC
GGTGGACCTG GAGCACCGCG AGCGGTGGTC CAGTCGTTCT TCCCGGGGGA GGAGGGTGGC
CGCGCGATCG CCGGGGTCCT GTCGGGACGG GTCGCCCCCT CGGGGCGCCT TCCCGTGAGC
ATGCCGCGCT CTGCCGGTGC GCAGCCGTAC TCGTACCTGC ACCCCGTCCT CGGCGGACCG
TCCGAGGTGA CCAGCACGGA CAGCACACCG CTGCTGCCCT TCGGTCACGG TCTGACGTAC
ACGACCTTCG AGCGCACAGC GCTCACGGTT GACGCCGAGG TGCTCGCCGG CGACGCCTTC
TCCGCCACGG TCCAGGTGAC GAACACGGGG GAGCGCGCCG GGACGGACGT CGTCCAGCTC
TACGCCCGCG ACGTCGTCGG GTCGGTGACA CGGCCCGTCG CGCAGCTGCT CGGCTACGCC
CGGGTCGACC TCGACCCGGG GGAGAGCGTC GTGGTGCGCC TCGACGTCCC GACCGCGCGC
CTGGCGTTCT CGGACCGCTC GATGGTGCGG GTCGTCGAGC CCGGCGAGGT CGAGCTGTGG
GTCGGCCCGT CGTGCGCCGA GAAGGAGACC ACGGCGTCGC TGACGATCAC CGGTCCTCTG
CACGAGGTGA CGCTCGCCGA CGCGCGGACC GTGCGCACCG AGGTGCTGCG GACCACAGAA
GCAGCGCTGG GGCGCTGA
 
Protein sequence
MNHQATAPAR IPLPQVSERV ARLHAQMTLD EKLAQLVGYW VDQGGEVVAP MQGEMATSGH 
YEEATAHGLG HLTRVYGTRP VDPVERAAWL WGEQRRLVRE TRLGIPALVH EECLTGLAAW
KAATFPTPLA WGASFDPGLV AEMGAAIGTS MRTLGIHQGL APVLDVIRDP RWGRVDECIA
EDPYVVGTIG TAYVQGLQSE GVHATLKHFV GYSASRAGRN HAPVHAGPRE IADVLLPPFE
MAVLDGGVRS VMNSYAEIDG IPVAADPTYL TGVLRDLWGF DGVVVSDYFT VAFLEVMHAV
AADRGEAASL ALAAGIDVEL PTGDAYTGPL AEKVRAGLVD EALVDRAVLR ALAQKEELGL
LDARFDDAPP TAVDLDPAGH RDVARRLAEE SLVLLTNDGT LPLLPGDGPA PSRVAVIGPN
ADRAEALMGC YSFANHVLAH HPDHEIGIEI PTVVEALRDE LRGAAPGTVV EHAPGCAVEG
EDRSGFEDAA ALAARSDVAV VVLGDQAGLF GRGTVGEGND VESLDLPGVQ RELVEAVAAT
GTPVVVVLLT GRPYAVDWAV GGPGAPRAVV QSFFPGEEGG RAIAGVLSGR VAPSGRLPVS
MPRSAGAQPY SYLHPVLGGP SEVTSTDSTP LLPFGHGLTY TTFERTALTV DAEVLAGDAF
SATVQVTNTG ERAGTDVVQL YARDVVGSVT RPVAQLLGYA RVDLDPGESV VVRLDVPTAR
LAFSDRSMVR VVEPGEVELW VGPSCAEKET TASLTITGPL HEVTLADART VRTEVLRTTE
AALGR