Gene Sked_11330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11330 
Symbol 
ID8632769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1309908 
End bp1310582 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003313911 
Protein GI269794456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0103975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACAA CACCTGAGGG CCTGCAGACC GAGAGCATCA GCGTCATGAT CGTCGACGAC 
CACGAGGTCG TCCGACGAGG CATCGCCGAG GTGATCGACA GGTCCGAGGG CATGAGCGTC
GTCGCCGAGG CCGGCAGCGT CGCCGAGGGC GTCCGTCGTG CGAGCCTCGT GCACCCCCAG
GTCATGCTCG TCGACCTCCA GCTGCCGGAC GGCACCGGGA TCGACCTCAT GCGCTCCGTC
CGCGCCACCC AGCCCGAGAC CCGCGCGATC GTGCTCACGT CCTTCGACGA CGACTCGGCC
CTGGCCGCCG CCCTCGAGGT GGGGGCCGCC GCCTACGTGC TCAAGAGCGT CCGCGGCGCG
GAGATCGCCG ACGTCGTGCG CGCCGTCGCC GCCGGACGGG TGCTGCTCGA CGAGCGCACC
ATCACGCGTC GTCGCCGCGA GCACGACGAC CCGACCGAGG ACCTCACCCC GAGCGAGGTG
CGCGTCGTCG ACCTCATCGG TGAAGGACTC TCGAACCGTG AGATCGCCGA GCGCCTGAGC
ATCGCGGAGA AGACCGTGAA GAACCACATC ACCTCGCTGC TGGCCAAGAT GGGCCTCCAG
CGCCGCACCC AGGTCGCCGC CTGGGTCGCC GCACGCAAGC ACCACGCCTG GGCGCAGGAC
TCCACGAACC GCTGA
 
Protein sequence
MDTTPEGLQT ESISVMIVDD HEVVRRGIAE VIDRSEGMSV VAEAGSVAEG VRRASLVHPQ 
VMLVDLQLPD GTGIDLMRSV RATQPETRAI VLTSFDDDSA LAAALEVGAA AYVLKSVRGA
EIADVVRAVA AGRVLLDERT ITRRRREHDD PTEDLTPSEV RVVDLIGEGL SNREIAERLS
IAEKTVKNHI TSLLAKMGLQ RRTQVAAWVA ARKHHAWAQD STNR