Gene Sked_11290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11290 
Symbol 
ID8632765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1306468 
End bp1307172 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNAse III 
Protein accessionYP_003313907 
Protein GI269794452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0299262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCGC ACGCAGGTCG TCAGGTCTCA CCGGCAACGC ACCTTCTCGA GGAGCTCGGG 
GTCCATCTGG ACCCCGAGCT CCTCGTGCTT TCCCTGACCC ACCGGTCCTT CGCGCACGAG
GCCGGCGGGA TCCCCACCAA CGAGCGTCTC GAGTTCCTCG GTGACGCGGT GCTGGGGCTC
GTGGCCGCCG AGGCGCTGTT CCGGCGCCAC CCCGACCGCC CCGAGGGCGA CCTCGCCAAG
ATGCGCGCGG CCTCGGTGTC GCAGCGCGCC CTGGCCGCCG TCGCCCGCAG GCTGTCCCTC
GGGGACTACA TCCTGCTCGG CAAGGGCGAG TCGCAGACGC GCGGGTTCGA CAAGGACTCG
ATCCTCTCGG ACACCGTCGA GTCGCTCATC GGCGCCGTCT ACCTGAGCCA CGGCCTCGAG
GAGGCCCGCA GCTTCGTCCA CCGGCTCCTG GACAGCACGC TCGACGCCGC GGCCGACCTC
GGCGCAGGCC TCGACTGGAA GACCTCGCTG CAGGAGGCTG CTGCCGAGCG CAACGTCGGT
GCTCCCGAGT ACACGAGCGA GGGCGAGGGC CCCGACCACG CCCGCATCTT CACGGCGCAC
GTGATCATCG ACGGCGAGAT CCTCGGCACC GGCCAGGGCA CCGCCAAGAA GCACGCCGAG
CAGATCGCCG CCGAGCAGGC CTACGTCGCC CTCACCGGGC GCTGA
 
Protein sequence
MASHAGRQVS PATHLLEELG VHLDPELLVL SLTHRSFAHE AGGIPTNERL EFLGDAVLGL 
VAAEALFRRH PDRPEGDLAK MRAASVSQRA LAAVARRLSL GDYILLGKGE SQTRGFDKDS
ILSDTVESLI GAVYLSHGLE EARSFVHRLL DSTLDAAADL GAGLDWKTSL QEAAAERNVG
APEYTSEGEG PDHARIFTAH VIIDGEILGT GQGTAKKHAE QIAAEQAYVA LTGR