Gene Sked_10990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10990 
Symbol 
ID8632735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1278794 
End bp1279579 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID 
Product2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase 
Protein accessionYP_003313879 
Protein GI269794424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATCG CGAGATTCAC CACTGGTGAC GACCCCCGCT TCGGATTTGT CCAGACCGAG 
AACGGCAAGG ACTACCTCGC CGTCCTCAAC GGCGACCCGC TCTACATGCC CGTGAACCCC
ACGGGTGAGC GGATCGAGAT CGGCGACGGC GTGCGCCTGC TCGCGCCCGT CATCCCGCGC
TCCAAGATCG TGGGAGTAGG CCGCAACTAC GCCGACCACG CGAAGGAGAT GGGCAACGAG
GTCCCCACGA GCCCGCTGCT GTTCTTCAAG CCGAACACCG CGGTGATCGG CCCGGACGAC
CCCATCGTGC TCCCCGACTT CACCGACGAG GTGAGCTACG AGTCCGAGCT GGCCGTGGTC
ATCGGGCGGA TCACCAAGGA CGTCACCCCC GAGCGCGCGC TCGAGCACGT CCTCGGCTAC
ACCGTCGCGA ACGACGTCAC GGCCCGCGAC GCCCAGCGCA CCGACGGCCA GTGGGCCCGC
GCCAAGGGCT TCGACTCGTC GTGCCCCGTC GGCCCGTGGA TCGAGACCGA GCTCGACACC
GACATGCTCG GCGTCTCGTC GCGCGTCAAC GGCGAGACCC GCCAGGACGG CAACACCCGC
GACCTCGTCT TCGACATCGC GTTCCTCGTC TCGTACATCT CCGAGGCCTT CACGCTGCTC
CCCGGCGACC TCATCCTCAC GGGCACGCCG GCGGGCGTCG GCCCGATCGT CGCGGGCGAC
CGCGTCGAGT GCGAGGTCGA GGGCATCGGC GTGCTGAGCA ACCCGGTCGT CCGTCGGAAC
GGATGA
 
Protein sequence
MRIARFTTGD DPRFGFVQTE NGKDYLAVLN GDPLYMPVNP TGERIEIGDG VRLLAPVIPR 
SKIVGVGRNY ADHAKEMGNE VPTSPLLFFK PNTAVIGPDD PIVLPDFTDE VSYESELAVV
IGRITKDVTP ERALEHVLGY TVANDVTARD AQRTDGQWAR AKGFDSSCPV GPWIETELDT
DMLGVSSRVN GETRQDGNTR DLVFDIAFLV SYISEAFTLL PGDLILTGTP AGVGPIVAGD
RVECEVEGIG VLSNPVVRRN G