Gene Sked_10460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10460 
Symbol 
ID8632682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1215594 
End bp1216946 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content75% 
IMG OID 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_003313829 
Protein GI269794374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.283421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGCG GCCGCCGCCT CTTCGCCGAC ACCACCCCGC TGCGCGAGTC GCCGGCATTC 
CGGCGCCTGT GGTGGGGCCT GGGCATCTCG AACCTCGGCG CTCAGCTCAC CGTGGTCGCG
GTCGGCCTCC AGGTCTACTC GCTCACCTCG TCGACCTTCG CCGTCGGGGT GCTCGGCATC
TGCGCGCTCG TCCCGCTCGT GCTGCTCGGG CTGTACGGCG GCGCGCTCGT CGACGCCTAC
GACCGCCGCA AGGTCGCGCT CTCGGCCTCG GTGGTGCTGT GGGTCGTGAC GATGCTGCTC
GCCGCGCAGG CGTGGCTCGA CGTCGGGTCG GTCGGGCTGC TCTACGGGCT CGTCGCGCTC
CAGTCGGCGG CCTTCGCGGT GAACAACCCG GCACGGTCGG CCATCATCCC CCGGCTGCTG
CGCCCTGCGC TGCTGCCGGC AGCCAACACC CTCATGACCA TCACCTGGAA CGTCGCCCTC
ACGGTGGGGC CGCTCGTCGC GGCGCTCGTC GTGAGCCGGT GGGGCTTCGG CATCGTCTAC
ACGGTCGACG TGCTCTGCTT CACCGCGGCC CTGTGGGCGC TGGTCCAGCT GCCCGGCATG
CCGCCCGAGC CGTCCCACGC CGGCGACGGC GGGGACGGCG CCGAGGGCGC GGACGACCCC
CGGGCCGGGG CCAAGGACGC CGCGCGCCGC CGGGTCGGGC TGTCGTCGGT CCTCGAGGGC
CTGCGCTACC TGGCGACACG GCCGAACGTC CGGATGACCT TCCTCGTCGA CCTCGTCGCG
ATGGTGCTCG CCATGCCCCG CGTGCTGTTC CCCGCCATCG GCGTGGTGAT CCTCGGCGGG
GGAGCGGCGA CGACCGGCGC GCTCACCGCG GCGCTCGCCG TGGGCGGGCT GCTCGCCGGG
CTGTTCTCGG GCGGGCTCAC CCGCGTGCAC CGGCAGGGCG TCGTCATCGC GTGGGCCATC
GTCGCCTGGG GGCTGTCGGT CGCGGGCTTC GGCGTCGTGC TCGTGCTCGC CGGCCGGACC
ACCCCGGACC ACGTGCTGGT GGTCGCCCTC GTGGCGGCGC TCGTCATGCT CGCGCTGTGC
GGGGCGTCCG ACGCGATCAG CTCGGTGTTC CGCCAGACGA TCCTGCAGTC CGCGACCCCC
GACGACATGC GTGGCCGCCT GCAGGGCGTG TTCATCGTGG TGGTCGCCGG CGGTCCGCGG
CTCGGCGACC TCGCCCTCGG TGCGCAGTCG TCCTGGTGGG GCGAGGGCTG GGCCGCCGTG
GTCGGAGGCC TCCTCTGCGT CGTGGTCCTC GCGCTCCTGC TCCGCTGGCA GCCCCGCCTC
CTCGCCTACG ACTCCCGCCA CCCCGAGCCC TGA
 
Protein sequence
MASGRRLFAD TTPLRESPAF RRLWWGLGIS NLGAQLTVVA VGLQVYSLTS STFAVGVLGI 
CALVPLVLLG LYGGALVDAY DRRKVALSAS VVLWVVTMLL AAQAWLDVGS VGLLYGLVAL
QSAAFAVNNP ARSAIIPRLL RPALLPAANT LMTITWNVAL TVGPLVAALV VSRWGFGIVY
TVDVLCFTAA LWALVQLPGM PPEPSHAGDG GDGAEGADDP RAGAKDAARR RVGLSSVLEG
LRYLATRPNV RMTFLVDLVA MVLAMPRVLF PAIGVVILGG GAATTGALTA ALAVGGLLAG
LFSGGLTRVH RQGVVIAWAI VAWGLSVAGF GVVLVLAGRT TPDHVLVVAL VAALVMLALC
GASDAISSVF RQTILQSATP DDMRGRLQGV FIVVVAGGPR LGDLALGAQS SWWGEGWAAV
VGGLLCVVVL ALLLRWQPRL LAYDSRHPEP