Gene Sked_09830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09830 
Symbol 
ID8632619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1137608 
End bp1138792 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type hemin transport system, periplasmic component 
Protein accessionYP_003313766 
Protein GI269794311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.423992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATCT CCCTCGGTGC CGCACGGCGC CGCCGCGCGA CCGCGAACGG ACTGCAGATG 
ACCGGCCACC CACGTACCGC ACGGACCGGA GCGCGCGCGC TGCTCGCCTC TGCGCTCGCC
GTGGTCGTCG CGGCGACCCT CGCCGGCTGC CAGGTCGCCG CGCCGCAGGC AGCCGTCCCG
GAGGTGGTCG ACGGCGGGGT GCGCCTCGTC GACGCGACGC TCGTCGACGA CCCGAAGGGG
CACGTCGGTC CCTCGACCGC CGTGCTCGCC GAGTCGGCGA TCCCGGTCCC CGACGTCGTG
CCCGAGCCGG CCCTGCCCGT GACGCTGACC GACATGCAGG GCACCGAGGT CACCGTCACC
GACACCAGCC GGATCCTCGC CCTCGACGTC TACGGCACCA CCTCGCGGAT CGTCTACGAG
CTCGGACTCG GCGACAGCCT CGTCGGGCGT GACGCGTCGT CGTCCTTCCC CGAGGTGGGC
GGGCTCCCGC TCGTGACGCA GTCCGGCCAC GACCTCAACG CCGAGGCGAT CCTCGCGCTG
TCGCCGACCC TGATCATCAC CGACACGAGC CTGGGCCCGT GGGACGTCGT GCTGCAGATG
CGCGACGCCG GCATCCCCGT GGTCGTCGTG GACTCCGAGC GCTCGCTCGA GAACGTCGAC
ACGATCATCG ACCAGGTGGC CACGGCCGTC GGGCTCCCCG AGGAGGGCGC CGCGCTCGCC
GAGCGGTCCG CGGCCCAGAT CGACGCCAAG ATCGCCGAGA TCGCGGCGAT CGCCCCGCAA
GACCCCGCCG AGCGGCTCCG CGTCGCCTTC CTGTACGTCC GGGGCCAGGC CGGCGTCTAC
TACATGTTCG GCACGGACTC CGGGGCCGAC ACCCTCATCA CGGCCCTCGG GGCGACGGAC
GTCGCGACCG AGATCGGCTG GACCGGCATG CGGCCGCTCA ACGACGAGGG GCTGGTCTCG
GCCGCCCCCG ACCTCGTGCT CGTCATGACC AAGGGCCTCG AGTCCACCGG CGGCGTGGAC
GGTCTCCTCG ACGCGATCCC CGCGCTGCAG AGCACCCCCG CCGGGGAGAA CCGTCGGGTC
GTCGACATGA GCGACGACGA GATCCTCAGC TATGGCCCCG GCACCGCCGA CGTCCTCGAC
GCCCTCGCCG TCGCCCTCTA CGCCCCGGGT GCGTCGACGC CATGA
 
Protein sequence
MEISLGAARR RRATANGLQM TGHPRTARTG ARALLASALA VVVAATLAGC QVAAPQAAVP 
EVVDGGVRLV DATLVDDPKG HVGPSTAVLA ESAIPVPDVV PEPALPVTLT DMQGTEVTVT
DTSRILALDV YGTTSRIVYE LGLGDSLVGR DASSSFPEVG GLPLVTQSGH DLNAEAILAL
SPTLIITDTS LGPWDVVLQM RDAGIPVVVV DSERSLENVD TIIDQVATAV GLPEEGAALA
ERSAAQIDAK IAEIAAIAPQ DPAERLRVAF LYVRGQAGVY YMFGTDSGAD TLITALGATD
VATEIGWTGM RPLNDEGLVS AAPDLVLVMT KGLESTGGVD GLLDAIPALQ STPAGENRRV
VDMSDDEILS YGPGTADVLD ALAVALYAPG ASTP