Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_09810 |
Symbol | |
ID | 8632617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1134550 |
End bp | 1135938 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003313764 |
Protein GI | 269794309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.735936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGGC ACCCCGCCGC GGGCGCCGCA GCGGCGCGTC CGCTCGAGCA GCACGTGTGG CCGACGACCG CCGCGCTCAC CACGGACGGC GAGCTCACCC TCGCCGGTCT GACGGCGACC GACCTGGCCC GTGACTTCGG CACGCCGGCC TTCGTCCTGG ACGAGCAGCA CTTCCGCGAC CGGGCACGGC TGTTCCGCGA CTCCTTCTCC GAGGCCTTCG GGTCGGTCGG GGCCGAGGTC GACGTCTACT ACGCCGGCAA GTCGTTCCTG TCGGTCGCCG TGGCGCGCTG GGCCCGTGAA GAGGGCCTGC GTGTCGACAC CTGCACGGGC GGTGAGCTCG CCGTCGCGCT CCGGGCCGGC GTGCCGGGTG CCGAGATCGG CCTGCACGGC AACAACAAGT CGGACGACGA GATCACGCGC GCCATCGAGG CGGAGGTCGG CCGCATCGTG GTCGACTCCT TCGCCGAGAT CGACCGGGTG GCCGAGCTGG CCCGCGCCGC AGGGCGCGAC GGCGGCGCAC GCGTCCCCGT CATGGTCCGG GTCACCACGG GCATCCACGC CGGCGGGCAC GAGTTCATCT CGACCGCGCA CGAGGACCAG AAGTTCGGTG TCTCGCTCAC CGGGGGACAG GCCCTCGCGG CCCTCCAGGC AGTCCTCGAG CACCCGGAGC TCGAGCTCCT CGGCGCGCAC ACGCACATCG GGTCCCAGAT CCAGGACGCC GCAGCCTTCG AGGCCAACGC CCGCAAGATG CTGGCGCTGA GGGCCGAGCT CCAGGCGGCC ACCGGCTACC TGCTCCCCGA GCTCGACCTC GGCGGCGGGT ACGGCATCGC GTACGTCCCC TCCGACGTCC CGATCGACGT ACCCGCGCTC GCCCGCGACC TCGCGGACGT CGTCGGCTCC GTCTGCGCAG AGCTCGGCAC CACGGTCCCG CGCATCTCGA TCGAGCCGGG CCGCTCCGTG GTCGGCTCGA CGACGGTCAC GCTCTACACG GTCGGCGTCG TCAAGCCGGT GACCCTCGAG GACGGCAGCG TCCGCACCTA CGTGTCGGTC GACGGCGGGA TGAGCGACAA CATCCGGCCC GCCCTCTACG AGGCCGAGTA CACCGCTCGC CTGGCCAACC GCACCGGCTC GGCGGAGACC GTCGCGGCCC GGGTGGTCGG CAAGCACTGC GAGAGCGGCG ACATCGTCAT CTCCGACATC GAGCTCCCGG CGGACGTCGC CCGCGGCGAC CTCCTCGCGG TGCCTGCGAC CGGCGCCTAC GGCCGCTCGA TGGCCAGCAA CTACAACCAC GTGCTGCGCC CGCCCGTGGT GGCCGTGGCC GACGGCGCCG CGCGCGTGAT CGTCCGTCGC GAGACCGAGG ACGACCTGCT CTCGCTCGAC GTCGGCTGA
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Protein sequence | MSGHPAAGAA AARPLEQHVW PTTAALTTDG ELTLAGLTAT DLARDFGTPA FVLDEQHFRD RARLFRDSFS EAFGSVGAEV DVYYAGKSFL SVAVARWARE EGLRVDTCTG GELAVALRAG VPGAEIGLHG NNKSDDEITR AIEAEVGRIV VDSFAEIDRV AELARAAGRD GGARVPVMVR VTTGIHAGGH EFISTAHEDQ KFGVSLTGGQ ALAALQAVLE HPELELLGAH THIGSQIQDA AAFEANARKM LALRAELQAA TGYLLPELDL GGGYGIAYVP SDVPIDVPAL ARDLADVVGS VCAELGTTVP RISIEPGRSV VGSTTVTLYT VGVVKPVTLE DGSVRTYVSV DGGMSDNIRP ALYEAEYTAR LANRTGSAET VAARVVGKHC ESGDIVISDI ELPADVARGD LLAVPATGAY GRSMASNYNH VLRPPVVAVA DGAARVIVRR ETEDDLLSLD VG
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