Gene Sked_09790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09790 
Symbol 
ID8632615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1131931 
End bp1132656 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313762 
Protein GI269794307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0176841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA AGTCAGGGCT GATCGACCGT GCCGTCAACC AGCTGCGGGC CCGGATCTCC 
TCCGGCGACT GGCCCGTCGG CAGCAAGATC CCGACCGAGC CCGCGCTCAC CGAGCTGCTC
GGCGTCGGCC GCAACACGGT CCGCGAGGCC GTGCAGTCCC TGGTGCACGC CGGCCTGCTG
GTCCGCCGGC AGGGGTCGGG CACCTACGTC CTGTCCGACT CCGAGCTCAT GGTGGTCATG
GGGCGCGAGA TCGCCGGTGC CACCCAGCAG CACGTGCTCG AGATCCGTCG CAGCCTCGAG
GTCGAGTCCG CCCGGCTCGC GGCAGTGCGC CGTACGCCCG CCGACATCGC GGTGCTGCGG
GACCTCAACA CCGCCCGGCA GGACGCCTTC GCCATCGGCG ACGTCGACCT CATGGTCTCG
AGCGACCTCG CCCTGCACCG TGCGATCGCG GCCGCCGCCG GCAACCCCGT CCTGCAGTCG
CTCTACGAGA ACCTCATCGA CGCGATCGGC GCCAACATCC GCACCAACGT CATCGGGCTG
GTGCACACCC GCTCCGAGGA CGACCACGAC GCGCTCGTCG ACGCGATCGA GGCGGGCGAC
CCCGAGCGCG CCATCGACGA GATCACGTCG TACCTGGCGG TGTACATCTC CGGCCAGGGG
GCGACCGGCT CCGAGGCCTC GGCGCCGAGC ACCGCGACCA GCGGCCGGAC CGGCCAGCCG
AGGTGA
 
Protein sequence
MSDKSGLIDR AVNQLRARIS SGDWPVGSKI PTEPALTELL GVGRNTVREA VQSLVHAGLL 
VRRQGSGTYV LSDSELMVVM GREIAGATQQ HVLEIRRSLE VESARLAAVR RTPADIAVLR
DLNTARQDAF AIGDVDLMVS SDLALHRAIA AAAGNPVLQS LYENLIDAIG ANIRTNVIGL
VHTRSEDDHD ALVDAIEAGD PERAIDEITS YLAVYISGQG ATGSEASAPS TATSGRTGQP
R