Gene Sked_09420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09420 
Symbol 
ID8632578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1086663 
End bp1089458 
Gene Length2796 bp 
Protein Length931 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotein translocase subunit secA 
Protein accessionYP_003313726 
Protein GI269794271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.915131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCGA TCCTCGACAA GGTCCTACGT TTCGGCGAGG GCCGGATCGT CAAGAAGCTG 
TCTGGCTTGG CGAAGCAGGT CAACGCCCTC GAAGACAGCT TCGAGGCGCT GACCGACGAA
GAGCTCCGCG AGGAGACCGA CCGCTTCAAG GAGCGGATCG AGCAGGGCGC GACCCTCGAC
GAGCTCCTCC CCGAGGCCTT CGCCGCGGTC CGTGAGGCCT CGCGCCGCAC CCTCGGGCAG
CGTCACTTCG ACGTCCAGCT CATGGGCGGG GCCGCGCTCC ACCTCGGCAA CATCGCCGAG
ATGAAGACCG GTGAGGGCAA GACCCTCGTC GCGACGCTCC CCGCGTACCT CAACGCCCTC
TCGGGCGAGG GCGTCCACGT GGTCACGGTC AACGACTACC TCGCCAAGTA CCAGAGCGAG
ATCATGGGCC GCGTGTTCCG GTTCCTCGGT CTGAGCACCG GGTGCATCCT GTCCGGGCAG
ACGCCGGCCG AGCGCCGCGA GCAGTACGCC AAGGACATCA CCTACGGCAC GAACAACGAG
TTCGGCTTCG ACTACCTCCG CGACAACATG GCGTGGTCGA CCGACGACCT CGTCCAGCGC
GGCCACAACT TCGCCGTCGT CGACGAGGTC GACTCGATCC TCATCGACGA GGCACGCACG
CCGCTCATCA TCTCGGGCCC CGCGTCCGGC GACACGAACA AGTGGTACGG CGAGTTCGCC
CGCGTGGTTC GCCGCCTCAC CGTCGACGAG GACTACGAGG TCGACGAGAA GAAGCGCACC
GTCGGCGTGC TCGAGCCCGG GATCGCCAAG GTCGAGGACT ACCTCGGCAT CGACAACCTC
TACGAGTCGC TCAACACGCC GCTCATCGGG TTCCTCAACA ACGCCATCAA GGCCAAGGAG
CTCTTCAAGC GCGACAAGGA CTACGTCGTC ATCAAGGGCG AGGTGCTCAT CGTCGACGAG
CACACCGGCC GTATCCTCGC CGGCCGCCGC TACAACGAGG GCATGCACCA GGCGATCGAG
GCGAAGGAGG GCGTGGCCAT CAAGGCCGAG AACCAGACCC TCGCGACGAT CACCCTGCAG
AACTACTTCC GCCTGTACTC CAAGCTCGGC GGCATGACCG GTACCGCTGA CACCGAGGCG
GCCGAGTTCC AGGGCACCTA CAAGCTCGGC GTCGTGCCCA TCCCGACCAA CCGCATCATG
CAGCGCATCG ACCAGCCCGA CCTCATCTAC AAGAGCGAGA ACGCGAAGTT CGACGCCGTG
GTCGAGGACA TCGTCGAGCG CCACGCGGCC GGCCAGCCGG TCCTCGTGGG CACCACGAGC
GTCGAGAAGT CCGAGCTCCT CGCGTCCAAG CTCAAGAAGC AGGGCGTGCC GCACGAGGTC
CTCAACGCGA AGCAGCACGA GCGCGAGGCG TCGATCGTCG CGCTCGCCGG CCGCAAGGGC
GCCGTGACCG TCGCGACCAA CATGGCCGGT CGAGGCACCG ACATCATGCT CGGCGGCAAC
GCCGAGTTCC TCGCGATCGC CGACCTCAAG ACGCGCGGGC TCGACGCCGC CGAGACCCCG
GAGGAGTACG AGGCCGCGTG GCCCGACGCC CTCGAGGCCG CCAAGAAGGC CGTGGCCGAC
GAGCACGACG AGGTCGCCGA GCTCGGCGGG CTCTACGTCC TGGGCACCGA GCGGCACGAG
TCGCGACGCA TCGACAACCA GCTGCGTGGC CGCTCCGGCC GTCAGGGCGA CCCGGGCGAG
TCCCGGTTCT ACCTGTCGAC CCAGGACGAC CTCATGCGCC TGTTCGGCAG CGCGCTCGCC
GAGTCGATGA TGCAGCGCTT CCCGGACGAC ATGCCGCTCG AGTCGAAGAT CGTCACCCGC
GGCATCGCCT CGGCGCAGGG TCAGGTCGAG AGCCGCAACT TCGAGATCCG CAAGAACGTC
CTCAAGTACG ACGACGTCCT GTCCCGTCAG CGCTCGGTCA TCTACGACGA GCGTCGTCGC
GTGCTCGACG GCGAGGACAT GGCCGAGCAG ATCCAGCACT TCCTCAAGGA CGTGCTCACG
GCCTACGTCG CGGGCGCCAC GGCAGCCGGG CACCCGGACT CCTGGGACCT CGACGGCCTC
TGGACCGCCC TCAAGGCCGT CTACCCCGTG TCGATCACCG TCGAGGAGGT CGTCCAGCAG
GCCGGCGGCG TCGACGCGCT GACCCACGAC CTCATCCTCG CCGAGGTGCT CTCCGACGCG
CAGCACGCGT ACACCTCGCG CGAGACCGAG CTGGGCGAGT CGAACATGCG CCAGCTCGAG
CGTCGTGTCG TGCTCTCGGT CCTCGACCGC AAGTGGCGCG AGCACCTCTA CGAGATGGAC
TACCTCAAGG AGGGCATCGG CCTGCGTGCC ATGGCCCAGC GCGACCCGCT CGTCGAGTAC
CAGCGCGAGG GGTTCCTGCT GTTCCAGGCG ATGACCGAGG CCATCAAGGA GGAGTCGGTC
GGCTACCTCT TCAACCTCGA GGTCAAGGTC GAGACGGCCC CGGTCGTGAC GGCGGCCGGC
GCGGCCGCTG CGGCAGGTAC CGCCGCGGCG CAGGCACTCG GGGCTGCCGG TGCGGCTGCG
GCCGACACCC AGCCCGCCGA GGAGGGCGAG CAGGTGCTCG TCGCCAAGGG GCTGGACGGT
CCTGACCGTC AGGTCCCGCT GAGCTACACC GCCCCGAGCG AGGACGGCGA CGGCGCTGTG
GTGACCGGGG CCAACGGTGC GACCACAGCC GTGGCCGCCG GCGACGACGC CGCGGGCAAC
CGCGAGGAGC GCCGCAAGGC CAAGAAGAAG AAGTAG
 
Protein sequence
MAAILDKVLR FGEGRIVKKL SGLAKQVNAL EDSFEALTDE ELREETDRFK ERIEQGATLD 
ELLPEAFAAV REASRRTLGQ RHFDVQLMGG AALHLGNIAE MKTGEGKTLV ATLPAYLNAL
SGEGVHVVTV NDYLAKYQSE IMGRVFRFLG LSTGCILSGQ TPAERREQYA KDITYGTNNE
FGFDYLRDNM AWSTDDLVQR GHNFAVVDEV DSILIDEART PLIISGPASG DTNKWYGEFA
RVVRRLTVDE DYEVDEKKRT VGVLEPGIAK VEDYLGIDNL YESLNTPLIG FLNNAIKAKE
LFKRDKDYVV IKGEVLIVDE HTGRILAGRR YNEGMHQAIE AKEGVAIKAE NQTLATITLQ
NYFRLYSKLG GMTGTADTEA AEFQGTYKLG VVPIPTNRIM QRIDQPDLIY KSENAKFDAV
VEDIVERHAA GQPVLVGTTS VEKSELLASK LKKQGVPHEV LNAKQHEREA SIVALAGRKG
AVTVATNMAG RGTDIMLGGN AEFLAIADLK TRGLDAAETP EEYEAAWPDA LEAAKKAVAD
EHDEVAELGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSTQDD LMRLFGSALA
ESMMQRFPDD MPLESKIVTR GIASAQGQVE SRNFEIRKNV LKYDDVLSRQ RSVIYDERRR
VLDGEDMAEQ IQHFLKDVLT AYVAGATAAG HPDSWDLDGL WTALKAVYPV SITVEEVVQQ
AGGVDALTHD LILAEVLSDA QHAYTSRETE LGESNMRQLE RRVVLSVLDR KWREHLYEMD
YLKEGIGLRA MAQRDPLVEY QREGFLLFQA MTEAIKEESV GYLFNLEVKV ETAPVVTAAG
AAAAAGTAAA QALGAAGAAA ADTQPAEEGE QVLVAKGLDG PDRQVPLSYT APSEDGDGAV
VTGANGATTA VAAGDDAAGN REERRKAKKK K