Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08960 |
Symbol | |
ID | 8632532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1025194 |
End bp | 1025931 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | glycosyl transferase |
Protein accession | YP_003313681 |
Protein GI | 269794226 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.206591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGACT TCCTCACCGA GCGCGTGCTC GTCATCATTC CCGCGTGGAA CGAGGAGGAG ACGCTCGGCG CCGTGCTCGA CGAGGTCGCC GCCGAGCTGC CCTACGTCGA CGTGCTCGTC GTCGACGACG GCTCGACGGA CCGCACCTAC GAGGTGGCCC GTGCCAAGGG TGTCCGTGTC CTCCAGCTCC CCGTCAACCT CGGAGTCGGC GGCGCCATGC GTGCGGGCTA CAAGTTCGCC GCCCGCAACC GCTACGGCTA CACCGTGCAG CTCGACGCCG ACGGCCAGCA CCCTCCCGCC GGTGTCGTCA CCATCTTCGA CGCGCTCTCC GCGAGCGGTG CCGACGTGAT GATCGGGGCG CGCTTCGCCG GCGAGGGCGA CTACGAGGCC AAGGGGCCGC GACGCTGGGC CATGAAGCTG CTCTCCACGA TCCTGTCGCG CGTCACCCGT GCGCGCCTCA CCGACACCAC GTCGGGCTTC AAGGCCTGCG GCCCGCGGGC CGTCGACCTG TTCTCGCGGA CCTACCCGGC GGAGTACCTG GGTGACACCG TCGAGGCCCT CGTCATCGCG GCACGCGCCG GGATGAAGGT CGGCCAGGTG GGCGTCACCA TGCGTCCGCG CGCGGGCGGT CGCCCGTCGC ACAGCCCCGT CAAGGCCGCG GTGTTCCTCG TCCGGGCGAT GCTCGCGCTG TGCATCGCCC TCACCCGACC GGGTGTGCCC AAGGAGGAGA GAGTCTGA
|
Protein sequence | MVDFLTERVL VIIPAWNEEE TLGAVLDEVA AELPYVDVLV VDDGSTDRTY EVARAKGVRV LQLPVNLGVG GAMRAGYKFA ARNRYGYTVQ LDADGQHPPA GVVTIFDALS ASGADVMIGA RFAGEGDYEA KGPRRWAMKL LSTILSRVTR ARLTDTTSGF KACGPRAVDL FSRTYPAEYL GDTVEALVIA ARAGMKVGQV GVTMRPRAGG RPSHSPVKAA VFLVRAMLAL CIALTRPGVP KEERV
|
| |