Gene Sked_08960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08960 
Symbol 
ID8632532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1025194 
End bp1025931 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycosyl transferase 
Protein accessionYP_003313681 
Protein GI269794226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.206591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACT TCCTCACCGA GCGCGTGCTC GTCATCATTC CCGCGTGGAA CGAGGAGGAG 
ACGCTCGGCG CCGTGCTCGA CGAGGTCGCC GCCGAGCTGC CCTACGTCGA CGTGCTCGTC
GTCGACGACG GCTCGACGGA CCGCACCTAC GAGGTGGCCC GTGCCAAGGG TGTCCGTGTC
CTCCAGCTCC CCGTCAACCT CGGAGTCGGC GGCGCCATGC GTGCGGGCTA CAAGTTCGCC
GCCCGCAACC GCTACGGCTA CACCGTGCAG CTCGACGCCG ACGGCCAGCA CCCTCCCGCC
GGTGTCGTCA CCATCTTCGA CGCGCTCTCC GCGAGCGGTG CCGACGTGAT GATCGGGGCG
CGCTTCGCCG GCGAGGGCGA CTACGAGGCC AAGGGGCCGC GACGCTGGGC CATGAAGCTG
CTCTCCACGA TCCTGTCGCG CGTCACCCGT GCGCGCCTCA CCGACACCAC GTCGGGCTTC
AAGGCCTGCG GCCCGCGGGC CGTCGACCTG TTCTCGCGGA CCTACCCGGC GGAGTACCTG
GGTGACACCG TCGAGGCCCT CGTCATCGCG GCACGCGCCG GGATGAAGGT CGGCCAGGTG
GGCGTCACCA TGCGTCCGCG CGCGGGCGGT CGCCCGTCGC ACAGCCCCGT CAAGGCCGCG
GTGTTCCTCG TCCGGGCGAT GCTCGCGCTG TGCATCGCCC TCACCCGACC GGGTGTGCCC
AAGGAGGAGA GAGTCTGA
 
Protein sequence
MVDFLTERVL VIIPAWNEEE TLGAVLDEVA AELPYVDVLV VDDGSTDRTY EVARAKGVRV 
LQLPVNLGVG GAMRAGYKFA ARNRYGYTVQ LDADGQHPPA GVVTIFDALS ASGADVMIGA
RFAGEGDYEA KGPRRWAMKL LSTILSRVTR ARLTDTTSGF KACGPRAVDL FSRTYPAEYL
GDTVEALVIA ARAGMKVGQV GVTMRPRAGG RPSHSPVKAA VFLVRAMLAL CIALTRPGVP
KEERV