Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08820 |
Symbol | |
ID | 8632518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1003422 |
End bp | 1006988 |
Gene Length | 3567 bp |
Protein Length | 1188 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | glycosyltransferase |
Protein accession | YP_003313667 |
Protein GI | 269794212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.338698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.471651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCCC TCGGGCCGAT CGTCCGGCGT GCCCGGAAGG CCGCCGTGGC GGTGGCCGTC CTCGCCCTGG CAGTCCTCGT GCTCGCAGTA CTCACCAGCA CCGGCGCGTT CTACGCCGCT GCGGCAGTGC TCTCCGTCGG CGCCCTCGGG CTGGGAGCGC TGTCTGTCCT CCGCTGGAGG ATCGTGGTGG GGGAGCTGTT CCTCTCAGCG CGGCGGCGCG CCCCTCACCT CAGGGGCTCG CGGTCACGAC GACGCTCGTC CGACGACGGC TCGCCGCTCG ACGGCACCGA GGACGTCCTA GAGGCCTGGT ATCTCATCCA GGCGTCCGGG ACCGAGTCCT CCCTGAACCG ACGAGAGCTG CTGTCGATCG CCAGGGGGCT CCGGCGGCGT GGTTATCTCA CGCGGGCGCT GGAGTGCACG AGTCACATGG TCCGCCGGTT CGACAACCCG GCCGACCGCG AGTTCGAGGC GAACCTCAAG GGTGAGATCG CCGTGCTGAG CGGTGAGGTC AGGTACACGC TCGCTCGCCC GTACACACCC CTCGACCCGG TCGCGGGGCG TGTCCTGCAC GTCGTCGGGA CCTCGCTGCC GGAGCAGCAG TCGGGCTACA CCCTCCGGAC CCAGTACACG GCGGTGGCCC AGCTGCAGTC GGGCCTCGAG CCGCACGTCG TCACCCAGGC CGGCTTCGGA GACGCGACGA GCGACGAACC GCAGGTGGTC GACGGTGTCG TCTACCACCG GTCAGCCGGC AACGAGCGGG GTACGGATCC CCTCGACGTC TGGTTCTCGC AGAACCTCGA CGCGGTCGAG AAGGTGATCC AGAGGGTTCG TCCGATGGTC CTGCACGCCG CGTCCGACCT GATCAACGCC CAGACTGCGC TGATCCTGGG ACACGCCTAC GGCATCCCGG TCGTCTACGA GTCGCGGGGG TTCTGGGAGG AGACCTGGCT GCAGCGAGAG GCGGACCGGT TCGGGTGGTC GGACCTGGAC GAGCTCGAGC GTGCTCACGG TCTCCCGGAC ACGTACACCC TGCGGCGGGA CACCGAGGAC GCGTGCCGGA GGGACGCCGA ACGGGTCGTC ACCCTCGCCG ACGTCATGGC GGCGCGGATC GCTGAGGGTG GTGTCGAGCC GAGCCGGATC AGCGTGATCC CGAACGGAGT GGACTCCGAG AGCTTCCCCG TCGTGACCAG GGACGAGACC CTTGCCCAGA CGCACGGGAT CGAGCCGGAG ACCGTGACGA TCGGTTACGT GTCGTCTCTC GTCGACTACG AGGGCATCGA CGTCCTGGTC GACGCGGTGG CTCTGCTCAG GGAGCAGGGG ACGACGAGCA AGGTCCGCCT GGTGGTCGTG GGCGACGGGC CCGAGCGGCC GGCCTTGATG GACCGGGCGG CGTCGCTCGG CCTCGACGAC GCGATCTTCA CCGGCAAGGT CCCGCACGAC GCGGTGCTGG ACTACTACGG CCTGATCGAC ATCTTCGTGG TCCCGCGACG CCCGGTCGAG GTGTGCCACC TCGTCACGCC GCTCAAGCCG TTCGAGGCGC TCTCGACAGG TCGCGTCCTG GTCATGTCCG ACGTGCGCGC CCTGAGCGAG ATCGCCGAGC GGAGCCAGGC GGTGACGCTC TTCGAGGCGG GGTCGGCGGA CTCGCTCGCC AAGCAGCTCT CTGCGTTGAT CTCTGCTCCG GACGAGAGGG CGCGGGTCGC CGCGGCCGGT GCACGATGGG TCCGGCAGAG CCGCACCTGG TCGCTGAACG CTGCGCTCTA CCACGAGGTG TACGAGGGGA TCGGCCTGGG GGCGTCGACG GTCGCCCGCA GCGTGCGGGG CGATCGAGGC ACGGCGGTCA AGGCGCTCTT CTCGCGCAGG CTGCCCGTCA GCTTCGGGTC GGCGGTCCGT CCGGAGCCTC GGTCCGCGGA GTCGGTCAAG CACGAGGGGT GGCGGCTCGG CCAGCACGAG CCCGTCGTCT TCGACGGTTC TCCGATCGAC TGGGACACGC TGTGCGCTGA GAACCGCTCG TGGGCGTTCA ACCTGCATGC GTGGGACTTC ATGGGCCCTG CCCTCGACCG GTACGCGGAG ACCGGTGACG CGGAGTACCT CGACTGGTCC CGCGACATCG CCCGGTCGTG GGCCGAGCGG TTCACCGAAG GTGACGCCGG GAGCACGATG GCCTGGTACG ACATGGCGAT CGGTCTCCGG GCGCCTCGCC TCGCGCTGCT CCTCGAGATG CTCGCGGTAC GCGACGACGA CCGCGACGTG GTCGACCTGC TCCTCCGCTG CGTCGACCGG CACCGTGCAG AGCTCGCCAA GGCAGTCGCC TTCAACGCGG GCTCCAACCA TGGCTTCTAC GTGGCCACGG GCCAGCTCAT GTTCAGCCTC CGGCTCCGTG GGCTGCCTGG GATGACCGAG ATGCTGGAGC AGGCGCGCAG GCGGCTGCGC CTGGTCGCCC GGGCGCAGTT CGCGGCCGAC GGCGGCCACC TCGAGCACTC GCCGGAGTAT CACCGGATGC TCCTGGACTC GTTCACCCGT GCCATCGAGC TCGGCCTCGT GGACGACCCC GAGGTCGTCG AGTCGATCCG TCGCGCGGAG GACGTGCTCG GCTGGATGGT CGAGCCGAGC GGTCACATGG TCCAGATCGG TGACAGCCCT CGCTGGAAGG TCCTCTCGCG AGAACCGGTG ACGAGCTCTC CGTCGACGGA GTTCATCTTG TCGCGGGGAG TGCGCGGAGC GCCTGCAGAG GAGACGCTGC TCGCGCTCCG CGAGTCGGGC TATGCCTTCG TGCGGTACCC CCAGCCGGCC GGGACCGAAG ACCACCAGGA CTCGAGCTAC CTGTCGTTCA TGGCGGGTTT CCACTCGAGG ACGCACAAGC ACGCAGACGA CCTCTCGTTC ACCTGGTTCG ACCGAGGCGA GGAGATCGTC GTCGACGCCG GGCGGTTCGG CTACGTCGGC CCGGTCGCCA AGGATTCTCC CGAGCGTCTG GCAGGTCACT TCTACTCAGC CCCGGAACGT CAGTACGTCG AGTCCACGAG GGCTCACAGC ACCGTCGAGG TCGGTGGGAA GGACCATGAC CGGGTTCGGC GAGAGCCTTA TGGCTCGGCA CTCGGGGTCG TCGAAGAACG CGACGGGCTC TACAGGCTCT GCGGGGCGGT CGACCACGAC ACGTGGCAGC ACGAGCGGGA GATCATCTTC TCCCCCGGAG AGTGGCTGCT CGTGACGGAT GCGGTCACCG GGCTCGCCCG CCGAGAGACC GTGCGGAGCC ACCTCAACAT CTCCGCGGGC TTCGCGCTCA AGCGCAAGAA CTCGTCGACG GTCACCGCGA CGAGGGACGG GGAGAGAGCC TTCTCGATCG TCGAGCTCAG CCAGGCAGCC TTCGTCCGAC CGACCAGCGG AGCCACCGCT CCGCTGAGAG GGTGGCGTTC GACGACCGAC CTCGAGCTCA TCCCGTCCTG GGCCGTCTCC TCGGTGGTGA AGGACGTCCG GGCGCACACC TTCCGCACGT TCCTCAGCTT CGACGCAGAC TTCGAGGCAG CCAGCGAGGC CATCCGGTCC CGGGGGATCC TGATCGAAAA GCCCTGA
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Protein sequence | MHSLGPIVRR ARKAAVAVAV LALAVLVLAV LTSTGAFYAA AAVLSVGALG LGALSVLRWR IVVGELFLSA RRRAPHLRGS RSRRRSSDDG SPLDGTEDVL EAWYLIQASG TESSLNRREL LSIARGLRRR GYLTRALECT SHMVRRFDNP ADREFEANLK GEIAVLSGEV RYTLARPYTP LDPVAGRVLH VVGTSLPEQQ SGYTLRTQYT AVAQLQSGLE PHVVTQAGFG DATSDEPQVV DGVVYHRSAG NERGTDPLDV WFSQNLDAVE KVIQRVRPMV LHAASDLINA QTALILGHAY GIPVVYESRG FWEETWLQRE ADRFGWSDLD ELERAHGLPD TYTLRRDTED ACRRDAERVV TLADVMAARI AEGGVEPSRI SVIPNGVDSE SFPVVTRDET LAQTHGIEPE TVTIGYVSSL VDYEGIDVLV DAVALLREQG TTSKVRLVVV GDGPERPALM DRAASLGLDD AIFTGKVPHD AVLDYYGLID IFVVPRRPVE VCHLVTPLKP FEALSTGRVL VMSDVRALSE IAERSQAVTL FEAGSADSLA KQLSALISAP DERARVAAAG ARWVRQSRTW SLNAALYHEV YEGIGLGAST VARSVRGDRG TAVKALFSRR LPVSFGSAVR PEPRSAESVK HEGWRLGQHE PVVFDGSPID WDTLCAENRS WAFNLHAWDF MGPALDRYAE TGDAEYLDWS RDIARSWAER FTEGDAGSTM AWYDMAIGLR APRLALLLEM LAVRDDDRDV VDLLLRCVDR HRAELAKAVA FNAGSNHGFY VATGQLMFSL RLRGLPGMTE MLEQARRRLR LVARAQFAAD GGHLEHSPEY HRMLLDSFTR AIELGLVDDP EVVESIRRAE DVLGWMVEPS GHMVQIGDSP RWKVLSREPV TSSPSTEFIL SRGVRGAPAE ETLLALRESG YAFVRYPQPA GTEDHQDSSY LSFMAGFHSR THKHADDLSF TWFDRGEEIV VDAGRFGYVG PVAKDSPERL AGHFYSAPER QYVESTRAHS TVEVGGKDHD RVRREPYGSA LGVVEERDGL YRLCGAVDHD TWQHEREIIF SPGEWLLVTD AVTGLARRET VRSHLNISAG FALKRKNSST VTATRDGERA FSIVELSQAA FVRPTSGATA PLRGWRSTTD LELIPSWAVS SVVKDVRAHT FRTFLSFDAD FEAASEAIRS RGILIEKP
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