Gene Sked_08500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08500 
Symbol 
ID8632486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp965002 
End bp966264 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content74% 
IMG OID 
Productsignal transduction histidine kinase 
Protein accessionYP_003313635 
Protein GI269794180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.115699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.612619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGT ACGACAGGAT CGGCCGCTGG GCCGAGGAGC GCCGCGCGCA GGTCGACGTC 
GTCGGGACGC TGCTCGCGCT GCTCGTGGTC GTCCCCATGG CGATGTCGAT GACGAGCGGC
TACGTCGACT TCGGCCTCGG CTACGGCCCG ACCGCCACGC GACCGGTCCT CGCGCTCTTC
GCCGTGGCGA CGGTCGCTCC CCTCGCCGTC AGGCGCACAC GCCCGGTGCT CTCCGTCGTC
CTCGTCTACA CGGCGACCCT GGTGCAGATG CTGTCCGGCA TCCCGATCCT GCTCCCGGCC
AACCTCTTCA TCCTCGTCGC GGTGTTCTCG ATCGCCGTCT ACGGGCCCCG GTGGGCGCAC
CTCGCCGCGA TCGGCACCGG TCTGGTCGGC TGCGGGCTGC TCGGCGCGAT GCTCGGGCTC
GCGAGCGGCC CGGGGAACGT CGTCTACGCG ACCGTCTTCT CGATGGTCTT CATCGGGCTG
ATGTTCATCG CCACCTGGGC CTTCGGCCTC GTGCGGCGCG CGCGGCGCGA GACCTACACG
GCGCTGCGCG ACCGCACCGA GCGCCTCGAG GTCGAGCGCG ACCAGCAGGC CCGCATCGCC
ACGGCCGCCG AGCGCTCGCG CATCGCCCGC GAGATGCACG ACATCGTCGC GCACTCCCTG
TCCGTGATGA TCGCGCAGGC CGACGGCGGC CGCTATGCCG CGAGCCACGA CCCCGAGGCA
GCCTCCCGCA CGCTCGGCAC CATCAGCGAG ACCGGGCGCG CCGCCCTGGC CGACATGCGC
CGCCTGCTCG GCGTGCTCCG CGACGACCCG GACGACGCCC GCGGCGACGG CGGCGCGGCC
GAGCGGACCC CGCAGCCCGC CGCCGGGGAC ATCACCGCCC TCGTCGAGCA GGTCCGCGCG
TCCGGCATGC GCGTCTCGCT GGTCCGCATG GGCACCGCCC GCACCCTCCC GCCCGGCACC
GGCCTCACGC TGTACCGGAT CTGCCAGGAG GCGCTCACCA ACATCCTCAA GCACGCCGGC
CCCGACCCTT CGGTCACCGT CGTGGTGACC TGGGAGCGAC GCGGCGTCAA GGTCGAGATC
GATGACGACG GCCGAGGCGC CTCGGCCGAC AGCGACGGCG CCGGCCAGGG TCTCCTCGGC
ATGCGCGAGC GCGCCGCCAT GTTCGGCGGG ACCGTCACCT CCGGGCCACG CCCGGGCGGC
GGCTTCCGTG TGATGCTTGA CCTCCCGCTG CCCGAACCCT CCCCGAGGAG CACCGACGCA
TGA
 
Protein sequence
MNWYDRIGRW AEERRAQVDV VGTLLALLVV VPMAMSMTSG YVDFGLGYGP TATRPVLALF 
AVATVAPLAV RRTRPVLSVV LVYTATLVQM LSGIPILLPA NLFILVAVFS IAVYGPRWAH
LAAIGTGLVG CGLLGAMLGL ASGPGNVVYA TVFSMVFIGL MFIATWAFGL VRRARRETYT
ALRDRTERLE VERDQQARIA TAAERSRIAR EMHDIVAHSL SVMIAQADGG RYAASHDPEA
ASRTLGTISE TGRAALADMR RLLGVLRDDP DDARGDGGAA ERTPQPAAGD ITALVEQVRA
SGMRVSLVRM GTARTLPPGT GLTLYRICQE ALTNILKHAG PDPSVTVVVT WERRGVKVEI
DDDGRGASAD SDGAGQGLLG MRERAAMFGG TVTSGPRPGG GFRVMLDLPL PEPSPRSTDA