| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07780 |
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| Symbol | |
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| ID | 8632415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 886021 |
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| End bp | 889659 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcription-repair coupling factor Mfd |
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| Protein accession | YP_003313565 |
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| Protein GI | 269794110 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.784778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.111573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCA CGGGCATCAT CTCCGCTCTC CTCGAGGACT CGGGCGCGCG CGCCACGGTC
GACCGTGTGC GTGCCCGCGG CGCGCTCGAC GTCATCGGCC CGGCCGGTGT GCGTCCGCCG
CTGCTCGCCG CCATGGCGGG GGCCCGGGCG AGCGACGGGC TCGTGCCCGA GACCGGTGTG
GAGGGCTCGC GCCCGCTCGT CGTCGTCACC GCGACCGGGC GTGAGGCCGA CGAGCTCGCC
TCCGCGCTGC GCTGCTACCT GCCCTACGAC GACGTCGCCG TGCTGCCCGC GTGGGAGACG
CTGCCGCACG AGCGGCTGTC GCCGCGCTCG GACACCGTGG CCAAGCGCAT CGCCGTGTTC
CGCCGGCTCG CCCACCCCTC GGCCGACCTC GGCATGACCG GTCCCGTGCG GGTGCTCGTC
ATGCCCGTGC GCGCCCTGCT GCAGCCCGTC GTCGACGGCC TCGGCGACCT CGAGCCGGTG
CGCCTCGAGA CGCGCGACCG CGCCGACCTG GCCGACGTCG CCGACCGCCT CTCCGCAGCT
GCCTACGCGC GCGTCGACAT GGTCGAGCGT CGCGGCGAGT TCGCCGTCCG CGGTGGCATC
CTCGACGTGT TCCCGCCGAC CGAGGACCAC CCGCTACGCG TGGAGTTCTG GGGTGAGGAG
GTCGAGGAGA TCCGCTGGTT CGCGGTCGCC GACCAGCGCT CGCTCGAGAT CGCCGACCAC
GGCGTGTGGG CACCGCCGTG CCGCGAGATG CTCCTCACCG ACGACGTCCG CGACCGTGCC
TCCGCTCTCG TGGAACAGCT GCCGGGCGCA GCCGAGATGC TCGACAAGAT GGGTGCGGGC
ATCGCCGTCG AGGGCATGGA GTCCCTCGCG CCGGTCCTCG TCGACCGTAT GGTCCCCGTC
CTCGACCTCG TGCCGGACGA CGCGCTCGTC GTGCTGAGCG ACCCCGAGCG TGTGCGCCGC
CGCGCGCACG ACCTCGTGGC CACCACCCAG GAGTTCCTCG CCGCCGCGTG GACGTCGGCT
GCGGCTGGCG GCTCGACGCC CATCGACCTG AGCGCGGCGT CCTTCGACAC CATCGAGGAC
GCCCGCGACC TCTCGGCCCG TCGCGGCCTC GGCTGGTGGA CCCTCAGCCC CTTCGGGCTC
GACAACCCCG AGGACGACAC CGACGACGAG GTGCCCGTCC AGGACCCTGA CGCCGACACG
CTGCGCATCG GCGCGCGTGA GGTCGAGGCG TACCACGGTG ACGTGGCGCG GGCCCTCGAC
GACGTGCGCG GCCTGCAGCA CGCCGGGTGG CGCCTCATCA TGACCACCGA GGGTCACGGT
CCCGCCAAGC GCATGGTCGA GCAGCTCAGC GGCGCCGACG CGCCGGCGCG CCTCGTCGGC
GAGATCACCG GCGACCCCGA GGGCGGCGTC GTCCTCGTGA CCCCCGCGCC GCTCGGCCCG
GGGTTCGTCG CGCCCGACCT CAAGATCGCG GTGTTCTCCG AGTCGGACAT GACCGGCCGC
GCCGGGTCGT CGACCCGTGA CATGCGCAAG ATGCCGTCCA AGCGGCGCAA CGTCGTCGAC
CCGCTGCAGC TGCGCGCCGG GGACTTCGTG GTCCACGAGC AGCACGGTGT CGGACGCTTC
GTCGAGCTGG TGCAGCGCAC CCTCGGCGGT GGCGCGGCCG CCGCGACCCG CGAGTACCTC
GTGGTCGAGT ACGCCTCCTC GCGGCGCGGA CAGCCGGGCG ACCGGCTGTT CGTGCCCACC
GACCAGCTCG ACCAGGTGAC CAAGTACACC GGTGGCGAGT CGCCCGCCCT CAACAAGATG
GGTGGCTCGG ACTGGGCCAA GACCAAGGGC CGCGCCAAGA AGGCCATCAA GGAGATCGCC
TCGGAGCTCA TCCGCCTGTA CTCGGCGCGC ATGGCCACGA AGGGGCACGC CTTCGGGCCG
GACACCCCGT GGCAGCGCGA GCTCGAGGAC GCCTTCGCGT ACACGGAGAC GCCCGACCAG
CTGGCGACCA TCGACGAGGT CAAGCAGGAC ATGGAGAAGA CGATCCCCAT GGACCGTCTG
GTCTGCGGCG ACGTCGGCTA CGGCAAGACC GAGATCGCGG TGCGGGCGGC CTTCAAGGCC
GTGCAGGACG GCAAGCAGGT CGCGGTCCTC GTGCCGACGA CGCTGCTCGT GCAGCAGCAC
TACGACACCT TCGCCGAGCG GTACGCCGGG TTCCCCGTGG TGGTCAAGGG CCTCTCGCGC
TTCCAGACGG ACAAGGAGGC CAAGGAGATC GTCGACGGCC TCAAGGAGGG GACGGTCGAC
GTGGTCATCG GCACGCACCG CCTGCTGTCC GGGTCGATCA AGTTCAAGGA CCTGGGGCTG
GTGGTGGTCG ACGAGGAGCA GCGCTTCGGT GTCGAGCACA AGGAGACCCT CAAGCAGCTG
CGCACCAACG TCGACGTGCT CGCCATGAGC GCGACGCCGA TCCCCAGGAC CCTCGAGATG
GCTGTCACGG GGATCCGTGA GATGTCGACG CTCGCGACGC CGCCGGAGGA GCGCCACCCG
GTGCTCACCT ACGTCGGTGC GTACGACGAC AAGCAGATCA CCGCGGCGAT CCGCCGTGAG
CTGCTCCGTG AGGGCCAGCT GTTCTACGTG CACAACAAGG TCGACTCGAT CGACCGGACC
GCGGCCCGCC TCAAGGAGCT GGTGCCGGAG GCGCGCATCG AGGTGGCGCA CGGGAAGATG
GGCGAGCACC AGCTGGAGCG CGTCATCATG GACTTCTGGG AGAAGAAGTT CGACGTGCTG
GTCTGCACGA CCATCATCGA GACGGGGCTG GACATCTCGA ACGCGAACAC CCTGATCCTC
GAGCGCGCGG ACATGCTGGG CCTGTCGCAG CTGCACCAGC TGCGCGGGCG CGTGGGTCGT
GGGCGGGACC GTGCGTACGC GTACTTCCTC TACCCGCCGG AGCGGCCGCT GACGGAGACT
GCGCACGACC GTCTGGCGAC CATCGCCGCG AACACGGACC TGGGCTCGGG CATGGCGGTG
GCCATGAAGG ACCTGGAGAT CCGTGGTGCG GGCAACCTGC TGGGTGGTGA GCAGTCGGGG
CACATCGCGG GGGTGGGCTT CGACCTGTAC GTGCGGATGG TCGGCGAGGC GGTCGCGGCG
TTCCGTGGTG AGGCGGAGGA GGAGGCCCCC GAGGTCACCA TCGAGCTCCC GGTCGACGCG
CACCTGCCGC ACGACTACAT CGGGCACGAG CGGCTGCGCC TCGAGGCGTA CCGGAAGATC
GCTGCGGCGC AGGACGAGAC GGCGCTCACG GACATCCGTG CGGAGCTCGT GGACAGGTAC
GGTGCGCTGC CCGAGGTGGT GGGCAACCTG TTCGACGTGG CGGCGTTCCG CAACTACGCC
CGTGCGGCGG GCCTGTCGGA CATCACCGCG CAGGGCAAGT TCGTGCGCTT CGCGCCCGTC
GACCTGGCCG AGTCCGCTGA GCTGCGCCTC AAGCGCCTGT ACCCGGGCAC CATCCTCAAG
CCCGCGATCC GCTCCGTGCT CGTGCCCTTC CCGACGACCG GCCGCATCGG CGGCCGCCCG
CTGCGAGGCG CCGAGATCCT CGCCTGGGCG ACCGAGCTCA TCGACGCGGT GATCAAGGGC
GACGTGAGTG CGGCGGCTTC GGTGGGGACG CGGCGCTAA
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| Protein sequence | MNLTGIISAL LEDSGARATV DRVRARGALD VIGPAGVRPP LLAAMAGARA SDGLVPETGV
EGSRPLVVVT ATGREADELA SALRCYLPYD DVAVLPAWET LPHERLSPRS DTVAKRIAVF
RRLAHPSADL GMTGPVRVLV MPVRALLQPV VDGLGDLEPV RLETRDRADL ADVADRLSAA
AYARVDMVER RGEFAVRGGI LDVFPPTEDH PLRVEFWGEE VEEIRWFAVA DQRSLEIADH
GVWAPPCREM LLTDDVRDRA SALVEQLPGA AEMLDKMGAG IAVEGMESLA PVLVDRMVPV
LDLVPDDALV VLSDPERVRR RAHDLVATTQ EFLAAAWTSA AAGGSTPIDL SAASFDTIED
ARDLSARRGL GWWTLSPFGL DNPEDDTDDE VPVQDPDADT LRIGAREVEA YHGDVARALD
DVRGLQHAGW RLIMTTEGHG PAKRMVEQLS GADAPARLVG EITGDPEGGV VLVTPAPLGP
GFVAPDLKIA VFSESDMTGR AGSSTRDMRK MPSKRRNVVD PLQLRAGDFV VHEQHGVGRF
VELVQRTLGG GAAAATREYL VVEYASSRRG QPGDRLFVPT DQLDQVTKYT GGESPALNKM
GGSDWAKTKG RAKKAIKEIA SELIRLYSAR MATKGHAFGP DTPWQRELED AFAYTETPDQ
LATIDEVKQD MEKTIPMDRL VCGDVGYGKT EIAVRAAFKA VQDGKQVAVL VPTTLLVQQH
YDTFAERYAG FPVVVKGLSR FQTDKEAKEI VDGLKEGTVD VVIGTHRLLS GSIKFKDLGL
VVVDEEQRFG VEHKETLKQL RTNVDVLAMS ATPIPRTLEM AVTGIREMST LATPPEERHP
VLTYVGAYDD KQITAAIRRE LLREGQLFYV HNKVDSIDRT AARLKELVPE ARIEVAHGKM
GEHQLERVIM DFWEKKFDVL VCTTIIETGL DISNANTLIL ERADMLGLSQ LHQLRGRVGR
GRDRAYAYFL YPPERPLTET AHDRLATIAA NTDLGSGMAV AMKDLEIRGA GNLLGGEQSG
HIAGVGFDLY VRMVGEAVAA FRGEAEEEAP EVTIELPVDA HLPHDYIGHE RLRLEAYRKI
AAAQDETALT DIRAELVDRY GALPEVVGNL FDVAAFRNYA RAAGLSDITA QGKFVRFAPV
DLAESAELRL KRLYPGTILK PAIRSVLVPF PTTGRIGGRP LRGAEILAWA TELIDAVIKG
DVSAAASVGT RR
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