| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07430 |
|---|
| Symbol | |
|---|
| ID | 8632380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 847365 |
|---|
| End bp | 848714 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase subunit F |
|---|
| Protein accession | YP_003313533 |
|---|
| Protein GI | 269794078 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0432719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AGCTGGCACC GGTCCTCTCC GCGCACTGGG ACGCCGAGCG CTCCTGGACG
CTGGAGACCT ACCTGGCGAA CGGCGGGTAC GAGGGCCTGC GCGCCGCGCT GGCCCAGCCC
GCGGCCGACG TCGTGCAGAC CGTCAAGGAC TCCGGGCTGC GGGGTCGCGG CGGTGCCGGG
TTCCCCACCG GCATGAAGTG GGGCTTCCTG CCCGCACCCG ACGGCGGGCC CCGGTACCTC
GTGGTCAACG CCGACGAGTC CGAGCCGGGC ACCTGCAAGG ACATCCCGCT CATGCTCGCC
TCGCCCCAGA CCCTCGTCGA GGGCGTCGCC ATCACCTCGT ACGCCATCGG GTGCCACCAC
GCCTTCATCT ACGTGCGCGG CGAGGTGCTG CACGTCTACC GGCGCCTGCT CAAGGCCGTC
GAGGAGGCCT ACGCCGCCGG GTACCTGGGC AAGGACGTCC TCGGCTCGGG CTTCGACCTC
GACGTCACGG TGCACGCCGG GGCGGGTGCG TACATCTGCG GCGAGGAGAC CGCGCTCCTC
GACTCCCTCG AGGGGCTGCG CGGGCAGCCG CGCCTCAAGC CGCCCTTCCC CGCGGTCGCC
GGCCTCTACG CCCGCCCGAC CGTGGTCAAC AACGTCGAGT CGGTCGCGTC GGTCCCGCAG
ATCGTCGCCC GCGGTGCCTC GTGGTTCACC TCGATGGGCA CCGAGCGCTC GGCCGGGCAC
GGCCTCTTCT CGCTGTCCGG GCACGTGACC CACCCGGGCC AGTACGAGGC GCCGCTCGGC
ATCACGCTGC GCGAGCTCCT CGACATGGCC GGCGGGGTCC GCGGCGGCCG GGCGCTGAAG
TTCTGGACGC CCGGGGGCTC GTCGACCCCG ATCTTCACCG CCGAGCACCT TGACGTGCCG
CTCGACTACG AGTCGGTCGC CGCGGCGGGC TCGATGCTCG GCACCCGCGC GCTGCAGATC
TTCGACGAGA CCACGTCGGT GGTCCGCGCG GTCACGCGGT GGACGGAGTT CTACGCGCAC
GAGTCCTGCG GCAAGTGCAC GCCGTGCCGC GAGGGCACCT ACTGGCTCAA GCAGGTGCTC
CGGCGCCTCG AGGCAGGCCA GGGCACGCAG GGCGACATCG ACACGCTCCT CGACACCTGC
GACAACATCC TCGGGCGCGC GTTCTGCGCC CTCGGCGACG GCGCGACGTC GTGCATCACC
TCGGCCGTCC AGTACTTCCG CGAAGAGTTC GAGGCCGGGA TGCACACCCC CGCGAGCGAG
CTGTTCCCGC CCGAGAGATC GGCACTGTTC GGCTACACCC CGAGGACGCG CGCGGCGACG
CTCGCGGGAG CAGGCGCTGG AGGCCACTGA
|
|---|
| Protein sequence | MSTELAPVLS AHWDAERSWT LETYLANGGY EGLRAALAQP AADVVQTVKD SGLRGRGGAG
FPTGMKWGFL PAPDGGPRYL VVNADESEPG TCKDIPLMLA SPQTLVEGVA ITSYAIGCHH
AFIYVRGEVL HVYRRLLKAV EEAYAAGYLG KDVLGSGFDL DVTVHAGAGA YICGEETALL
DSLEGLRGQP RLKPPFPAVA GLYARPTVVN NVESVASVPQ IVARGASWFT SMGTERSAGH
GLFSLSGHVT HPGQYEAPLG ITLRELLDMA GGVRGGRALK FWTPGGSSTP IFTAEHLDVP
LDYESVAAAG SMLGTRALQI FDETTSVVRA VTRWTEFYAH ESCGKCTPCR EGTYWLKQVL
RRLEAGQGTQ GDIDTLLDTC DNILGRAFCA LGDGATSCIT SAVQYFREEF EAGMHTPASE
LFPPERSALF GYTPRTRAAT LAGAGAGGH
|
|---|
| |