| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07410 |
|---|
| Symbol | |
|---|
| ID | 8632378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 845060 |
|---|
| End bp | 846412 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase subunit D |
|---|
| Protein accession | YP_003313531 |
|---|
| Protein GI | 269794076 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.977582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.014911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGC AGAGCAGCAG CACGCCGCAC GCGGCGCGTC CGCCGGTCGA CGACACCTCG
GTCCCGTCCT TCGAGTCGTC GGGCGGAGAC TGGGACGAGA TCGCGGCCGA GATCGCCGAG
CTCGGCGAGG AGCGCATCGT CGTCAACATG GGCCCGCAGC ACCCGTCGAC CCACGGCGTG
CTGAGGCTCA TGCTCGAGAT CGACGGCGAG ACGGTCACCG AGGCACGGTG CGGGGTGGGC
TACCTGCACA CGGGCATCGA GAAGAACATG GAGTTCCGCA CCTGGACGCA GGGCGTCGCG
TTCTGCACCC GGATGGACTA CCTGGCGCCG TTCTTCCAGG AGGCCGCGTA CTGCCTCGGG
ATCGAGCGGC TGCTCGGCGT CGAGGACGAC GTCCCCGAGC GGGCGCAGGT GATCCGGGTG
CTGCTCATGG AGCTCAACCG GGTGGCGAGC CACCTCGTGT GCCTGGGGAC CGGCGGCAAC
GAGATGGGCG CCACGACGGT GATGACCGTG AGCTTCACGG CACGCGAGGA GATCCTGCGG
ATCTTCGAGT CGATCACCGG GCTGCGGATG AACCACGCGT TCATCCGCCC GGGCGGGGTG
GCCCAGGACG TCCCGGCGGG TCTGACCGAG GACTTCTGGC ACATGGACAC CGAGGTGCGC
AAGTACCTCG CGCAGCTCGG CGACCTCATG CTCGCCAACC CGATCTTCAG GTCTCGTCTG
GTCGGCACCG GGCACCTCAA CCTCGCGGGC TGCATGGCGC TCGGGGTCAC CGGTCCCGTG
CTCCGCTCGG CCGGCCTGCC CTACGACGTC CGCAAGTCCG CGCCGTACTG CGGCTACGAG
ACCTACGACT TCGACGTCCC GACCTCCACG GAGGCCGACT GCTACTCGCG CGTGGTGCTG
CGCATCGAGG AGTGCTACCA GTCGCTCAAG ATCGCGGCGC AGTGCATCGA GCGCCTCGAG
CGCTCGACGG GCGACCCGGT GATGGTCGCC GACAAGAAGA TCGCGTGGCC CGCGCAGCTG
GCCATCGGCA CCGACGGCGC CGGCAACTCC CTCGAGCACA TCAGGGAGAT CATGGGCGAG
TCCATGGAGT CGCTGATCCA CCACTTCAAG CTCGTGACCG AGGGCTTCCG GGTCCCGGCG
GGGCAGGTGT TCCAGACCGT GGAGCACCCG CGCGGCGAGC TCGGCGTGCA CCTCGTCTCC
GACGGCGGGA CGAGACCCTA CCGGGCGCAC TTCCGTGACC CGTCGTTCAA CAACCTGCAG
GCCGTGGCCC TGATGTGCGA GGGCGGCCAG GTCGCCGACG TCGTCGTCGC GGTGGCCTCG
CTCGACCCCG TCCTCGGAGG TGTAGACCGA TGA
|
|---|
| Protein sequence | MSTQSSSTPH AARPPVDDTS VPSFESSGGD WDEIAAEIAE LGEERIVVNM GPQHPSTHGV
LRLMLEIDGE TVTEARCGVG YLHTGIEKNM EFRTWTQGVA FCTRMDYLAP FFQEAAYCLG
IERLLGVEDD VPERAQVIRV LLMELNRVAS HLVCLGTGGN EMGATTVMTV SFTAREEILR
IFESITGLRM NHAFIRPGGV AQDVPAGLTE DFWHMDTEVR KYLAQLGDLM LANPIFRSRL
VGTGHLNLAG CMALGVTGPV LRSAGLPYDV RKSAPYCGYE TYDFDVPTST EADCYSRVVL
RIEECYQSLK IAAQCIERLE RSTGDPVMVA DKKIAWPAQL AIGTDGAGNS LEHIREIMGE
SMESLIHHFK LVTEGFRVPA GQVFQTVEHP RGELGVHLVS DGGTRPYRAH FRDPSFNNLQ
AVALMCEGGQ VADVVVAVAS LDPVLGGVDR
|
|---|
| |