Gene Sked_07260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07260 
Symbol 
ID8632363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp829269 
End bp830138 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content73% 
IMG OID 
Product1,4-dihydroxy-2-naphtoate prenyltransferase 
Protein accessionYP_003313516 
Protein GI269794061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.433691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.242194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT CCTCCGAGTG GGTCGCGGGC GCACGCCCCC GCACCCTCCC TGCCGCTGCG 
ACCCCGGTGA TCGTCGGGTC CGGCGCCGCC GCGCAGATCG ACGGCTTCCA CCTGGGTGCC
GCGCTCCTCG CGCTCGTGGT CGCCGTCGCC CTCCAGGTGG GCGTGAACTA CGCGAACGAC
TACTCGGACG GCATCCGTGG CACCGACCTC GACCGGGTGG GCCCCCTGCG GCTGACCGGC
TCCGGGGCGG CACAGGCGTC GCAGGTCAAG ACGGCGGCCT TCGCCTCCTT CGGGGTGGGG
GCCCTCGCCG GGCTGGTGCT CGTGCTGATC ACCGGCCACT GGTGGCTGCT GCTCGTCGGC
GCGCTCGCCA TCGCCGCGGC CTGGTACTAC ACGGGTGGCA AGAACCCCTA CGGGTACCGC
GGCCTCGGCG AGGTCGGCGT CTTCGTCTTC TTCGGGCTCG TGGCCGTGCT CGGGACCACC
TACACCCAGG CGGACCGCAT CAGCGTCCCC GCGGTCCTGG GAGCCGTCGC CGTCGGTCTG
CTGGCCTGCG CGATCCTCAT GGTCAACAAC ATCCGCGACG TCCCGACCGA CATGGTCGCG
GGAAAGCGCA CCCTCGCCGT GCGGCTGGGA GAGTTCCGGG CCCGGCGCCT GTACGTGGCG
ATGATCTGGC TGCCGCTGCT GCTCGGCGTG CTGTGCGCCT TCGCGAGCGG GTGGGCCGTC
ATCGTGCTGC TGCTCGCCTT CCCCGCGGTG CTGCTGTCCA TCCCGGTGGT CGCCGGGGCG
CGCGGGCTGC TGCTCGTGCC CGTCCTCGCG GGGACCGGCA TGTACGAGCT CGGCTTCGGC
CTACTTCTCG GGCTCGGTCT CGCGCTCTGA
 
Protein sequence
MATSSEWVAG ARPRTLPAAA TPVIVGSGAA AQIDGFHLGA ALLALVVAVA LQVGVNYAND 
YSDGIRGTDL DRVGPLRLTG SGAAQASQVK TAAFASFGVG ALAGLVLVLI TGHWWLLLVG
ALAIAAAWYY TGGKNPYGYR GLGEVGVFVF FGLVAVLGTT YTQADRISVP AVLGAVAVGL
LACAILMVNN IRDVPTDMVA GKRTLAVRLG EFRARRLYVA MIWLPLLLGV LCAFASGWAV
IVLLLAFPAV LLSIPVVAGA RGLLLVPVLA GTGMYELGFG LLLGLGLAL