Gene Sked_07160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07160 
Symbol 
ID8632353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp821042 
End bp821743 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID 
ProductAT-rich DNA-binding protein 
Protein accessionYP_003313506 
Protein GI269794051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.160551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CGCAGCCTGA GCCCCGACCC GCCGTGCCGG GGCTCGACGA CGTCGTCGAG 
ATCCGCCGGA GCATGCCCCA GGCGAGCGTC GAGCGGCTGC CCGGGTACCT GCGGGTGCTC
ACCGAGCTGT CCTCCCACGG CGTGACGAGC GCCTCGTCGC AGCAGCTGGC CGAGCTGGCC
GGCGTCGGGC CTGCGCAGCT CCGCAAGGAC CTGAGCCACC TGGGGTCGCA CGGCCGCCGC
GGCGTCGGGT ACGACGTCGA CACGCTGCGC GAGCGGGTCC AGACGGCGCT CGGGCTCGTC
GTCGAGCTGC CGGTGGCGAT CGTCGGGGCC GGCAACCTCG GGCACGCCCT CGCCAACTAC
TCGGGCTTCG GTGCGCGCGG CTTCACCGTC GTGGCGCTGC TCGACGCGAG CCCTGCGCTC
GTGGGGACCG AGGTGGCGGG GGTGGTGGTC GAGGACGTCG CGCGCCTCGC GGAGGTCGTG
CGCGACCTCG AGGTGGCCAT CGTGGTCATC GCGACCCCCG GGGACCAGGC GCAGCGGGTG
TGCGACGTGG TGGTCGGGGC GGGTGTCCGC GAGATCCTCA ACTTCGCCCC GCGTGCGCTG
CACGTGCCGG AGGGCGTCGA GCTGCGGTCG GTCGACCTCG GCAGCGAGCT GCAGATCCTC
GCCTTCCACT CGCGCGAGCG GTCCGGTCGC CCGCAGGTGT AG
 
Protein sequence
MTAPQPEPRP AVPGLDDVVE IRRSMPQASV ERLPGYLRVL TELSSHGVTS ASSQQLAELA 
GVGPAQLRKD LSHLGSHGRR GVGYDVDTLR ERVQTALGLV VELPVAIVGA GNLGHALANY
SGFGARGFTV VALLDASPAL VGTEVAGVVV EDVARLAEVV RDLEVAIVVI ATPGDQAQRV
CDVVVGAGVR EILNFAPRAL HVPEGVELRS VDLGSELQIL AFHSRERSGR PQV