Gene Sked_06870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06870 
Symbol 
ID8632324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp786811 
End bp787896 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted nucleic-acid-binding protein (contains the HHH domain) 
Protein accessionYP_003313481 
Protein GI269794026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAACT CCCCCGCGCA CGTCGACGAG CTTCTCCGCG AGACCCTGGC AGCCGTGGCG 
CCAGGCACAG AGCTGCGCGA CGGGCTCGAA CGCATCCTCC GTGGACGGAC GGGGGCGCTC
GTCGTCCTCG GCTTCGACGA GACCGTCGAG ACCATGAGCT CGGGCGGCTT CGCGCTCGAC
GTCGAGTTCT CCGCGACCCG CCTGCGCGAG CTCGCCAAGA TGGACGGCGC GATCGTCATG
GACCGCGAGG CCGACCGCAT CCTGCGCGCG GCCGTCCAGC TGCTCCCGGA CCCGACGATC
GAGACGACGG AGTCGGGCAC CCGGCACCGT ACCGCCGAGC GTGTGGCCAA GCAGACCGGG
TTCCCCGTGA TCTCGGTGAG CCAGTCGATG CGCATCGTCG CGCTCTACGT CGGCGGCTCC
CGCTACGTCC TCGAGGACCC GGACACGATC CTGTCCCGCG CGAACCAGGC CCTCGCGACC
CTCGAGCGCT ACAAGGCCCG TCTCGACGAG GTCAGCGGGA CGCTGTCCGC CCTCGAGATC
GAGGACCTCG TCACCGTCCG CGACGTGTGC GCCGTGGTCC AGCGCCTCGA GATGGTCGGC
CGCATCTCCG AGGAGATCGC CGGCTACGTG GTCGAGCTCG GCACCGAGGG CCGCCTGCTC
GCCCTCCAGC TCGACGAGCT CATCGGCGGG CTCGGGTCCG ACCGCGAGTT CGTGATCCGC
GACTACGTCG AGGTGGGCCG CAAGGACCAC TCCGTCCAGG ACGTGCTCGC CAGCCTGGCG
CTCCTCGACT CGACCGAGCT GCTCGACCTC GGTCTCATCG GCCGGGTCCT GGGGCTCCCC
GGCGGGGGCG AGGCGCTCGA CGCAGCCGTC GCACCCCACG GGTACCGCCT CCTCGCGAAG
GTCCCCCGCC TGCCCAGCAC CATCGTGGCC CGGCTGGTCA GCCACTTCGG TGGTCTGCAG
AAGCTCCTCG CCGCGACCGT CGAGGACCTG ATGGCGGTCG ACGGAGTCGG CGAGCAGCGC
GCGCGGTCGG TCCGCGAGGG CCTGTCGAGG CTCGCCGAGT CGAGCATCCT CGAGCGCTAC
GTCTGA
 
Protein sequence
MANSPAHVDE LLRETLAAVA PGTELRDGLE RILRGRTGAL VVLGFDETVE TMSSGGFALD 
VEFSATRLRE LAKMDGAIVM DREADRILRA AVQLLPDPTI ETTESGTRHR TAERVAKQTG
FPVISVSQSM RIVALYVGGS RYVLEDPDTI LSRANQALAT LERYKARLDE VSGTLSALEI
EDLVTVRDVC AVVQRLEMVG RISEEIAGYV VELGTEGRLL ALQLDELIGG LGSDREFVIR
DYVEVGRKDH SVQDVLASLA LLDSTELLDL GLIGRVLGLP GGGEALDAAV APHGYRLLAK
VPRLPSTIVA RLVSHFGGLQ KLLAATVEDL MAVDGVGEQR ARSVREGLSR LAESSILERY
V