Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06820 |
Symbol | |
ID | 8632319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 781346 |
End bp | 783103 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_003313476 |
Protein GI | 269794021 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACCT CCGGAACGTC GTCCAAGCTC ACCCCGCAGA GCCGAGCGCA GTCGCTCGAC GCCCTCCGCG CGAGCGCCGA GGGTGAACCT CTCGACGTCC TCGTCATCGG CGGAGGTGTC ACCGGAGCCG GTATCGCCCT CGACGCCGTG ACCCGCGGCC TGACGACCGC GGTCGTCGAG TCCCAGGACT GGGCCGCAGG CACCTCGAGC CGATCCAGCA AGCTCGTCCA CGGTGGCCTG CGCTACCTGC AGATGCTCGA CTTCAACCTC GTGCACGAGG CACTGACCGA GCGCGACCTG CTCATCAAGA AGCTGGCACC GCACCTCGTC AAGCCCGTCT CCTTCCTCTA CCCGCTCGAG CACAGGGTCT GGGAGCGCGG GTACGTCGGC GCCGGCATCA TGCTCTACGA CACGCTCGCC AGCCTCATCC CGGGCAAGCG CGCGCTGCCG TTCCACAAGC ACGTGTCCCG CAAGGGCATG GAGCGCCTCT TCCCCGACCT GCGCCACGAC GCCGCGGTCG GCGCGGTCCG CTACTGGGAC GGCTCCGTCG ACGACGCCCG CCTGGTCTCG ACCCTCATCC GCACCGCAGC CTCCTACGGC GCGAGCGCAG CCACCCGCAC CCAGGTGGTC GAGCTCACCA AGGACTCCGG CGGACGCGTC GACGGCGCGG TCCTCCAGGA CCTCGAGACC GGCGACACCT TCCCGGTCAA GGCCCGCAAC GTCATCAACG CCACCGGCGT CTGGACCGAG GAGACCGAGG GTCTAGCCGG CGAGGAGGGC GGCCTGCGGG TGCTCGCCTC CAAGGGCGTG CACATCGTCG TCCCGCGGGA GCGCATCAAG GGCACCGTCG GGCTCATCCT GCAGACCGAG AAGAGCGTGC TCTTCGTGAT CCCGTGGTCG CGCTACTGGG TCATCGGCAC CACGGACACC CCGTGGAAGC AGGAGCTCAA GCACCCCGTC GCCACCGCCG CGGACATCGA GTACGTCCTC GACCACGCGA ACGCCGTCCT GGCAGACCCG CTCACCAAGG ACGACATCAT CGGCACCTGG GCCGGCCTGC GGCCGCTGCT GCAGCCGGGC ACCAAGGAGG GCACCTCGTC CGCCAAGGTC TCGCGCGAGC ACACCGTCGC CTCCCCCGCC CCGGGCCTCA CGGTCATCGC CGGCGGAAAG CTCACCACCT ACCGCGTCAT GGCGGAGGAC GCGGTGGACT TCGCGCTCGG CGACGGAGCC AAGGCCCGTC CGTCGATCAC CACCGAGGTG CCGCTGCTCG GCGCCGTCGG GCTGGACGTC CAGCAGAACT GGGGACGCCG GCACGCACGC ACCTACGGCT GGACCCCGGC ACTCGTCGAC CACCTGCTCC ACCGGTACGG CTCGCTGCTC TCCGACATCG TCGAGCTCTG CGAGACCGAC CCGAGCATGT CCAAGCCGCT CGAGCACGCA CCCGCGTACC TGCGTGCCGA GATCGCGTAC GCGGTGAGCC ACGAGGGGGT CCTGCACCTC GAGGACATCC TGCTCCACCG CACACGCCTC AACTACGAGG TCGCCGACCG GGGCCTCGCG GCCCTCGAGG AGATCTCGCA GATCGCCGCA GCCGGGCTCG GCTGGGACGA GGACACCCGA CTCGCAGAGG TCGCTTCCTA CACGGCACGC GCCGAGGCAG AGGCCGCCGC AGAGCTCGAG CCCGACGACG AGTCGGCCGA GCGCACTCGG CTCGCCGCCG CGGACGTCAG CCCGACGGCC ACGCTCTCCC CCAGGTAG
|
Protein sequence | MSTSGTSSKL TPQSRAQSLD ALRASAEGEP LDVLVIGGGV TGAGIALDAV TRGLTTAVVE SQDWAAGTSS RSSKLVHGGL RYLQMLDFNL VHEALTERDL LIKKLAPHLV KPVSFLYPLE HRVWERGYVG AGIMLYDTLA SLIPGKRALP FHKHVSRKGM ERLFPDLRHD AAVGAVRYWD GSVDDARLVS TLIRTAASYG ASAATRTQVV ELTKDSGGRV DGAVLQDLET GDTFPVKARN VINATGVWTE ETEGLAGEEG GLRVLASKGV HIVVPRERIK GTVGLILQTE KSVLFVIPWS RYWVIGTTDT PWKQELKHPV ATAADIEYVL DHANAVLADP LTKDDIIGTW AGLRPLLQPG TKEGTSSAKV SREHTVASPA PGLTVIAGGK LTTYRVMAED AVDFALGDGA KARPSITTEV PLLGAVGLDV QQNWGRRHAR TYGWTPALVD HLLHRYGSLL SDIVELCETD PSMSKPLEHA PAYLRAEIAY AVSHEGVLHL EDILLHRTRL NYEVADRGLA ALEEISQIAA AGLGWDEDTR LAEVASYTAR AEAEAAAELE PDDESAERTR LAAADVSPTA TLSPR
|
| |