Gene Sked_06590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06590 
Symbol 
ID8632296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp752842 
End bp753921 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003313453 
Protein GI269793998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGACC GCGACCGCAG CAGGCACGGC GACGATGCGG TCGACCCTCG CCCAGGTGGT 
CGGCGCCGTG CGCCGTCGAT GGCCGACGTC GCCAAGATCG CCGGTGTCTC CGCGCAGACC
GTCTCCCGTG TCGCCAACGG CCGCGCCAAC GTGGACCTCG CCACCCGCGA CAAGGTGCTC
AGCGCCATGC GCGTGGTGGG CTACCAGCCC AACGGTGCGG CGCGCGCCCT CGCGACGGGC
CGCTTCGGGG CCTTCGGTGT CATCTCCTTC TCGATCTCGA GGATCGGCGA CGCCCGGACC
ATCGAGGCCA TCGCCAACGC GAGCCGCACC GCCGGGTACT CGATCAACCT CATGGTCGTC
GAGCGCCCCA CACTCGGCGG CGTGAGCGCG GCGATCGCCA ACCTCGCCGG TCAGAACGTC
GACGGGGTCG TGATCATCCA GGCGGAGATC CTCGACGTCC CCTCGCTGGT CATCGGCCCG
ACGCTCCCGG TGGTCATCAC CGACACGTAC CCGTCGCCGC ACCCGGACTA CCCGATCGTC
GACACCGACC AGGAGGGCGG CGTGCGTCGT GCCGTCGAGC ACCTCCTGGC GATGGGCCAC
GAGACGGTGT GGCACGTGGC CGGGCCGACG ACGTCGAGCG CCGCCCAGGA GCGCACCGAG
GCCTGGGGCC AGGTGCTCAC CCGCGCCGGT GCGAGCGTCC CGCCCGTGCA CCGCGGCGAC
TGGACGGCCG GGTCGGGCTA CCGGATCGGC GCGCTGCTGG CGGAGGTCCC GCGGGACGAG
CTCACCGCGG TGTTCTGCGC CAACGACCAG ATGGCCATCG GGCTCATGCG CGCCTTCCAC
GAGCGGGGTG TGCGCATCCC GCAGGACGTG TCGGTGGTCG GCTTCGACGA CATCGACGAG
GCGGAGTTCG TGTGGCCGCC CCTCACGACC GTCCGCCAGC GCTTCGACGA GGTCGGCGAG
CTGTGCGTGC AGACCATGCT CGAGCAGATC GAGCAGCAGG GACGCGGCGC CAAGACGCTG
CGCCTGGTCC CCGTCGAGCT CATCGTCCGC GACAGCTCAG GCCCGGCGCC GCGGCGGTAG
 
Protein sequence
MRDRDRSRHG DDAVDPRPGG RRRAPSMADV AKIAGVSAQT VSRVANGRAN VDLATRDKVL 
SAMRVVGYQP NGAARALATG RFGAFGVISF SISRIGDART IEAIANASRT AGYSINLMVV
ERPTLGGVSA AIANLAGQNV DGVVIIQAEI LDVPSLVIGP TLPVVITDTY PSPHPDYPIV
DTDQEGGVRR AVEHLLAMGH ETVWHVAGPT TSSAAQERTE AWGQVLTRAG ASVPPVHRGD
WTAGSGYRIG ALLAEVPRDE LTAVFCANDQ MAIGLMRAFH ERGVRIPQDV SVVGFDDIDE
AEFVWPPLTT VRQRFDEVGE LCVQTMLEQI EQQGRGAKTL RLVPVELIVR DSSGPAPRR