Gene Sked_06430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06430 
Symbol 
ID8632280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp729264 
End bp732701 
Gene Length3438 bp 
Protein Length1145 aa 
Translation table11 
GC content73% 
IMG OID 
Productcellobiose phosphorylase 
Protein accessionYP_003313437 
Protein GI269793982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCT CACCCGCCCA CCCGTCCGCC TCGTCCGCCG CCGTGCTCAC CACGCCGTCG 
AGCCCCTCGG CCCCGGTCGA CCAGGTGCTC CAGGCCGGCC CGACGCGCAT CGCGCTGAGC
GCCACGGGTG ACGTCCGCTC GATCCGCCAC GGCGAGTCGA CGCTCGTCAG CCAGTACAGC
CCCTCGGACC ACGACGCGAT GGTCGGCGGC GTCTTCCTGC GCCGTCACTC CGCGCACGGC
GTGCAGAGCG CACCGCTCGT CGGCGCGCAC GCCTCCGGCA CGTCAACCGT CTCCGACGGC
GTCGCCCGCT GGGCCGGCGA GGCCCTCGGC GCGCGCTACG TCGTCACCCT CGCGCTCGAC
CCGGCGGGCG ACCTCTGGGT GTGGCGCGTC GACCTCGAGT CGACCGACGG CACCGGCGGG
ACCTACGACG TGGTCGTCGC GCAGGACCTC GCCCTCGCCC CGGAGGGCAT GTCGCTCAGC
AGCGAGCCCT ACGTCAGCCA GTACCTGGTG CACCACGTGG TCGACGGGTC GGGCGCCGGC
TCGGTGCTCG CCAGCCGCCA GACGATGGCG ACCGCACCGG TCCTCCCGCT CGCCGTGAGC
GCGATCGTCG AGGGCGCCCG CGCGCACCTG ACCGACGGGT TCTCTCTCTA CGGACTCGAC
AGCAAGCTCG ACGGGCACGC CCACGCCCTC GACACCGCCG CGTGGGACTC CCTCGTCTAC
CAGTACGAGC TCGCGATGCC CACGCTGCTC GGCCCGGAGC TGGACCTCTC TGAGCCCCGC
ACCGTGCATG CGGTGACCGC GTTCGTGCCC GACTACCGCG GCGACCTCGA CGACGCCCTC
GACGCCGTCC CGGACATGCT CGGGCGCGCC GTCGCGGCAG CGGCATCAGC CGGAGACCCC
GGCGCTCACA GCACGGCCGA CGCCTCGACC GCACCGCGGT CGCTGCTCGT CTCCGCGCCG
CTGCTCGCCG GCCGTGACCT CACCGAGGAC GAGCTCGTCT CCCTCGGCGC CGGCTCGGTC
TTCCAGCCGG AGCGCGCGGC CGACGGCTCG CTGCTCTCCT ACTTCACGGC CGACGCCACC
CACGTCGTCT CGCGCGCCAA GGAGCTCGCG GTCGAGCGCC CGCACGGGCA CGTGGTCAAG
GCACGCACCG ACGTCGCGCC CGAGGACAAC ATCCTCTCGT CGACCTCCTA CGTCTACGGC
GTGTTCGCCT CGCACGTGGT GGTCGGCAAC ACCTCGGTCA ACCGCTTCGT GTCGGTCCAG
CGCAACCACC TCAACCTGCT CCGCTCGAGC GGAGTCCGTG CCCTCGTCCA GGTGGACGGC
ACGTGGCAGC TGCTCGGCGT GCCCTCGGCG CTCGTCATGG ACCTCGGCGG GCTCCGCTGG
GTCTACGAGA CGCCGGTCGG CCGCATCGAG GTCCGCACCA CGGCCAGCGC CGACGACCGT
GCCCTCGAGG TGCGTGTCGA CTCCGAGAAC CCCGTCGAGC TGCTCGTGAC TGTCGACGTC
GAGCTCGGCG ACCACGCGTG GACGGCCGAG CCCGCGCTCG ACGGCCGCGC CCTGGTCTTC
ACGGCCGACG CCGGGACCGA CGTCGCGGCG CACTGCCCTG ACCTCACCTA CGTCCTCGGC
TCCTCCACCG GACGCATCGG CGACGACTCG GTGCTCTTCG CCGACGGCGC CCCGCGCCGG
ACGGGCGTCG TCACCGTCGC CTTCGACGCG ACGACCTCCG CGTCCGTCGT GCTCACCGGT
GACCTCGAGG GACGCGCCCC GGCCCTCGCC GCCGCCGAGA AGACCCTCGG CTCCGCGCTC
GACGTCCCCG CCGAGCTCGC GGCGCACCGC CGCTACGTCG GCGACTTCAC GCGCAACCTG
CACGTCGAGG GCTCGGGCCG CCTCGCCGAG GTCAACCTGC TGCTCCCGTG GTTCACGCAG
AACGCGCTCA TCCACTTCCT CGTGCCGCAC GGCCTCGAGC AGTACTCCGG CGCCGCGTGG
GGCACCCGCG ACGTGTGCCA GGGACCGCTC GAGCTCAACC TCGCCTTCGG TCGCTTCGAC
ACCGCCCGCG AGATCGTGCT GCGAGTCTTC GGCCACCAGG ATGCCGACGG GACCCTGCCG
CAGTGGTTCA TGTTCGACGC GTACTCCGAG CGCTACTCGG ACGAGGCGCA CGGCGACGTC
GTCGTCTGGC CGCTCATGGC GCTCGGCGAG TACCTGTCCG CGACGGGCGA CACGTCGGTC
CTCGACGTCG AGCTGCCGTT CTGGGACAAC GCGACCCGCC AGGCCGGGAC CGAGGCGGTG
CCCGTCCTCG AGCACGTGCG CGCCTCGCTC GAGTACATCC GCACCCACCG CGCGCCGGGC
ACCCAGCTGC TCTCGTACGG CGAGGGCGAC TGGGACGACA CGCTCCAGCC CGCGCAGGAG
TCCATGAAGG AGGAGATGGC GTCGGCGTGG ACCGTCGCGC TCCTCTTCCA GGCGACCTCG
ACGCTGTCCG CGCTGCTGCG CGGCGGGGCG CACGACGCCC TGGCCGACGA GCTCCAGGCC
GAGGCCGACG TCATCGCGGC CGAGTTCACC GACCGCCTGA TGATCGACGA CGTGCTCGCC
GGCTACGTGG TGTTCGCCCC CGAGGGCCCG TGGCCGGTCA TCCACCCGAC GGACGACCGC
ACCGGGCTGC AGTACCGCCT CATCCCCATG ACGCGCTCGA TCATCGCCGG GCTGTTCACG
CCCGAGCAGG TGCTGCGCCA CGAGGCGCTC GTCGAGGACA ACCTGCACTT CCCCGACGGC
GTGCGCCTCA TGGACCGCCC GGCGCCGTTC CAGGACGGGA TCACCAAGTA CTTCCGTCGC
GGTGAGCAGG CGGCGAACGT CGGTCGAGAG ATCGGCCTCA TGTACACCCA CGCCCACGTC
CGCTACACGC AGGCCCTGGC GACGCTGGGG CGCGAGCGCC TCGTCACCGA GCTGCTGCGC
ATCAGCCCCG TGGGGCAGTT CGGCCGCCTG GACCACAGCG CACCGCGTCA GCGCAACTGC
TTCTACTCGT CCTCCGACGC CGGCTTCACC GACCGGTACG ACTTCGCCGA GAACTTCGGC
AAGCTCCGTG ACGGGTCCGT CCCGGTCAAG GGTGGGTGGC GCGTGTACTC CTCGGGCCCC
GGCATCTACC TGCGCCAGCT GGTGCACGGT GCGCTGGGCA TCACCGAGCG TGCGGGCGGC
GTGGTCTTCG ACCCGGTGCT CGCGGCCGAG GACGACGGCA CGGAGCTCGG CATCGACCTG
GCCGGCGTGC ACCGCCGGGT GACCCTGCAC GTGGTGGCCG GCGACGCCCC GGTCCGCGTC
GAGGTCGGCG GCGTGACCGT CGAGGGCTCC GAGGTCCCCG CGCACTACCG CTCGGGCGGT
CTCTTCGTCG CCACCGAGCA GCTCACGGGC GACGTCGACG TCTACGTCGG CCTCGACCGC
AGCACGCTGG GAGCCTGA
 
Protein sequence
MNSSPAHPSA SSAAVLTTPS SPSAPVDQVL QAGPTRIALS ATGDVRSIRH GESTLVSQYS 
PSDHDAMVGG VFLRRHSAHG VQSAPLVGAH ASGTSTVSDG VARWAGEALG ARYVVTLALD
PAGDLWVWRV DLESTDGTGG TYDVVVAQDL ALAPEGMSLS SEPYVSQYLV HHVVDGSGAG
SVLASRQTMA TAPVLPLAVS AIVEGARAHL TDGFSLYGLD SKLDGHAHAL DTAAWDSLVY
QYELAMPTLL GPELDLSEPR TVHAVTAFVP DYRGDLDDAL DAVPDMLGRA VAAAASAGDP
GAHSTADAST APRSLLVSAP LLAGRDLTED ELVSLGAGSV FQPERAADGS LLSYFTADAT
HVVSRAKELA VERPHGHVVK ARTDVAPEDN ILSSTSYVYG VFASHVVVGN TSVNRFVSVQ
RNHLNLLRSS GVRALVQVDG TWQLLGVPSA LVMDLGGLRW VYETPVGRIE VRTTASADDR
ALEVRVDSEN PVELLVTVDV ELGDHAWTAE PALDGRALVF TADAGTDVAA HCPDLTYVLG
SSTGRIGDDS VLFADGAPRR TGVVTVAFDA TTSASVVLTG DLEGRAPALA AAEKTLGSAL
DVPAELAAHR RYVGDFTRNL HVEGSGRLAE VNLLLPWFTQ NALIHFLVPH GLEQYSGAAW
GTRDVCQGPL ELNLAFGRFD TAREIVLRVF GHQDADGTLP QWFMFDAYSE RYSDEAHGDV
VVWPLMALGE YLSATGDTSV LDVELPFWDN ATRQAGTEAV PVLEHVRASL EYIRTHRAPG
TQLLSYGEGD WDDTLQPAQE SMKEEMASAW TVALLFQATS TLSALLRGGA HDALADELQA
EADVIAAEFT DRLMIDDVLA GYVVFAPEGP WPVIHPTDDR TGLQYRLIPM TRSIIAGLFT
PEQVLRHEAL VEDNLHFPDG VRLMDRPAPF QDGITKYFRR GEQAANVGRE IGLMYTHAHV
RYTQALATLG RERLVTELLR ISPVGQFGRL DHSAPRQRNC FYSSSDAGFT DRYDFAENFG
KLRDGSVPVK GGWRVYSSGP GIYLRQLVHG ALGITERAGG VVFDPVLAAE DDGTELGIDL
AGVHRRVTLH VVAGDAPVRV EVGGVTVEGS EVPAHYRSGG LFVATEQLTG DVDVYVGLDR
STLGA