Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06430 |
Symbol | |
ID | 8632280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 729264 |
End bp | 732701 |
Gene Length | 3438 bp |
Protein Length | 1145 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | cellobiose phosphorylase |
Protein accession | YP_003313437 |
Protein GI | 269793982 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGCT CACCCGCCCA CCCGTCCGCC TCGTCCGCCG CCGTGCTCAC CACGCCGTCG AGCCCCTCGG CCCCGGTCGA CCAGGTGCTC CAGGCCGGCC CGACGCGCAT CGCGCTGAGC GCCACGGGTG ACGTCCGCTC GATCCGCCAC GGCGAGTCGA CGCTCGTCAG CCAGTACAGC CCCTCGGACC ACGACGCGAT GGTCGGCGGC GTCTTCCTGC GCCGTCACTC CGCGCACGGC GTGCAGAGCG CACCGCTCGT CGGCGCGCAC GCCTCCGGCA CGTCAACCGT CTCCGACGGC GTCGCCCGCT GGGCCGGCGA GGCCCTCGGC GCGCGCTACG TCGTCACCCT CGCGCTCGAC CCGGCGGGCG ACCTCTGGGT GTGGCGCGTC GACCTCGAGT CGACCGACGG CACCGGCGGG ACCTACGACG TGGTCGTCGC GCAGGACCTC GCCCTCGCCC CGGAGGGCAT GTCGCTCAGC AGCGAGCCCT ACGTCAGCCA GTACCTGGTG CACCACGTGG TCGACGGGTC GGGCGCCGGC TCGGTGCTCG CCAGCCGCCA GACGATGGCG ACCGCACCGG TCCTCCCGCT CGCCGTGAGC GCGATCGTCG AGGGCGCCCG CGCGCACCTG ACCGACGGGT TCTCTCTCTA CGGACTCGAC AGCAAGCTCG ACGGGCACGC CCACGCCCTC GACACCGCCG CGTGGGACTC CCTCGTCTAC CAGTACGAGC TCGCGATGCC CACGCTGCTC GGCCCGGAGC TGGACCTCTC TGAGCCCCGC ACCGTGCATG CGGTGACCGC GTTCGTGCCC GACTACCGCG GCGACCTCGA CGACGCCCTC GACGCCGTCC CGGACATGCT CGGGCGCGCC GTCGCGGCAG CGGCATCAGC CGGAGACCCC GGCGCTCACA GCACGGCCGA CGCCTCGACC GCACCGCGGT CGCTGCTCGT CTCCGCGCCG CTGCTCGCCG GCCGTGACCT CACCGAGGAC GAGCTCGTCT CCCTCGGCGC CGGCTCGGTC TTCCAGCCGG AGCGCGCGGC CGACGGCTCG CTGCTCTCCT ACTTCACGGC CGACGCCACC CACGTCGTCT CGCGCGCCAA GGAGCTCGCG GTCGAGCGCC CGCACGGGCA CGTGGTCAAG GCACGCACCG ACGTCGCGCC CGAGGACAAC ATCCTCTCGT CGACCTCCTA CGTCTACGGC GTGTTCGCCT CGCACGTGGT GGTCGGCAAC ACCTCGGTCA ACCGCTTCGT GTCGGTCCAG CGCAACCACC TCAACCTGCT CCGCTCGAGC GGAGTCCGTG CCCTCGTCCA GGTGGACGGC ACGTGGCAGC TGCTCGGCGT GCCCTCGGCG CTCGTCATGG ACCTCGGCGG GCTCCGCTGG GTCTACGAGA CGCCGGTCGG CCGCATCGAG GTCCGCACCA CGGCCAGCGC CGACGACCGT GCCCTCGAGG TGCGTGTCGA CTCCGAGAAC CCCGTCGAGC TGCTCGTGAC TGTCGACGTC GAGCTCGGCG ACCACGCGTG GACGGCCGAG CCCGCGCTCG ACGGCCGCGC CCTGGTCTTC ACGGCCGACG CCGGGACCGA CGTCGCGGCG CACTGCCCTG ACCTCACCTA CGTCCTCGGC TCCTCCACCG GACGCATCGG CGACGACTCG GTGCTCTTCG CCGACGGCGC CCCGCGCCGG ACGGGCGTCG TCACCGTCGC CTTCGACGCG ACGACCTCCG CGTCCGTCGT GCTCACCGGT GACCTCGAGG GACGCGCCCC GGCCCTCGCC GCCGCCGAGA AGACCCTCGG CTCCGCGCTC GACGTCCCCG CCGAGCTCGC GGCGCACCGC CGCTACGTCG GCGACTTCAC GCGCAACCTG CACGTCGAGG GCTCGGGCCG CCTCGCCGAG GTCAACCTGC TGCTCCCGTG GTTCACGCAG AACGCGCTCA TCCACTTCCT CGTGCCGCAC GGCCTCGAGC AGTACTCCGG CGCCGCGTGG GGCACCCGCG ACGTGTGCCA GGGACCGCTC GAGCTCAACC TCGCCTTCGG TCGCTTCGAC ACCGCCCGCG AGATCGTGCT GCGAGTCTTC GGCCACCAGG ATGCCGACGG GACCCTGCCG CAGTGGTTCA TGTTCGACGC GTACTCCGAG CGCTACTCGG ACGAGGCGCA CGGCGACGTC GTCGTCTGGC CGCTCATGGC GCTCGGCGAG TACCTGTCCG CGACGGGCGA CACGTCGGTC CTCGACGTCG AGCTGCCGTT CTGGGACAAC GCGACCCGCC AGGCCGGGAC CGAGGCGGTG CCCGTCCTCG AGCACGTGCG CGCCTCGCTC GAGTACATCC GCACCCACCG CGCGCCGGGC ACCCAGCTGC TCTCGTACGG CGAGGGCGAC TGGGACGACA CGCTCCAGCC CGCGCAGGAG TCCATGAAGG AGGAGATGGC GTCGGCGTGG ACCGTCGCGC TCCTCTTCCA GGCGACCTCG ACGCTGTCCG CGCTGCTGCG CGGCGGGGCG CACGACGCCC TGGCCGACGA GCTCCAGGCC GAGGCCGACG TCATCGCGGC CGAGTTCACC GACCGCCTGA TGATCGACGA CGTGCTCGCC GGCTACGTGG TGTTCGCCCC CGAGGGCCCG TGGCCGGTCA TCCACCCGAC GGACGACCGC ACCGGGCTGC AGTACCGCCT CATCCCCATG ACGCGCTCGA TCATCGCCGG GCTGTTCACG CCCGAGCAGG TGCTGCGCCA CGAGGCGCTC GTCGAGGACA ACCTGCACTT CCCCGACGGC GTGCGCCTCA TGGACCGCCC GGCGCCGTTC CAGGACGGGA TCACCAAGTA CTTCCGTCGC GGTGAGCAGG CGGCGAACGT CGGTCGAGAG ATCGGCCTCA TGTACACCCA CGCCCACGTC CGCTACACGC AGGCCCTGGC GACGCTGGGG CGCGAGCGCC TCGTCACCGA GCTGCTGCGC ATCAGCCCCG TGGGGCAGTT CGGCCGCCTG GACCACAGCG CACCGCGTCA GCGCAACTGC TTCTACTCGT CCTCCGACGC CGGCTTCACC GACCGGTACG ACTTCGCCGA GAACTTCGGC AAGCTCCGTG ACGGGTCCGT CCCGGTCAAG GGTGGGTGGC GCGTGTACTC CTCGGGCCCC GGCATCTACC TGCGCCAGCT GGTGCACGGT GCGCTGGGCA TCACCGAGCG TGCGGGCGGC GTGGTCTTCG ACCCGGTGCT CGCGGCCGAG GACGACGGCA CGGAGCTCGG CATCGACCTG GCCGGCGTGC ACCGCCGGGT GACCCTGCAC GTGGTGGCCG GCGACGCCCC GGTCCGCGTC GAGGTCGGCG GCGTGACCGT CGAGGGCTCC GAGGTCCCCG CGCACTACCG CTCGGGCGGT CTCTTCGTCG CCACCGAGCA GCTCACGGGC GACGTCGACG TCTACGTCGG CCTCGACCGC AGCACGCTGG GAGCCTGA
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Protein sequence | MNSSPAHPSA SSAAVLTTPS SPSAPVDQVL QAGPTRIALS ATGDVRSIRH GESTLVSQYS PSDHDAMVGG VFLRRHSAHG VQSAPLVGAH ASGTSTVSDG VARWAGEALG ARYVVTLALD PAGDLWVWRV DLESTDGTGG TYDVVVAQDL ALAPEGMSLS SEPYVSQYLV HHVVDGSGAG SVLASRQTMA TAPVLPLAVS AIVEGARAHL TDGFSLYGLD SKLDGHAHAL DTAAWDSLVY QYELAMPTLL GPELDLSEPR TVHAVTAFVP DYRGDLDDAL DAVPDMLGRA VAAAASAGDP GAHSTADAST APRSLLVSAP LLAGRDLTED ELVSLGAGSV FQPERAADGS LLSYFTADAT HVVSRAKELA VERPHGHVVK ARTDVAPEDN ILSSTSYVYG VFASHVVVGN TSVNRFVSVQ RNHLNLLRSS GVRALVQVDG TWQLLGVPSA LVMDLGGLRW VYETPVGRIE VRTTASADDR ALEVRVDSEN PVELLVTVDV ELGDHAWTAE PALDGRALVF TADAGTDVAA HCPDLTYVLG SSTGRIGDDS VLFADGAPRR TGVVTVAFDA TTSASVVLTG DLEGRAPALA AAEKTLGSAL DVPAELAAHR RYVGDFTRNL HVEGSGRLAE VNLLLPWFTQ NALIHFLVPH GLEQYSGAAW GTRDVCQGPL ELNLAFGRFD TAREIVLRVF GHQDADGTLP QWFMFDAYSE RYSDEAHGDV VVWPLMALGE YLSATGDTSV LDVELPFWDN ATRQAGTEAV PVLEHVRASL EYIRTHRAPG TQLLSYGEGD WDDTLQPAQE SMKEEMASAW TVALLFQATS TLSALLRGGA HDALADELQA EADVIAAEFT DRLMIDDVLA GYVVFAPEGP WPVIHPTDDR TGLQYRLIPM TRSIIAGLFT PEQVLRHEAL VEDNLHFPDG VRLMDRPAPF QDGITKYFRR GEQAANVGRE IGLMYTHAHV RYTQALATLG RERLVTELLR ISPVGQFGRL DHSAPRQRNC FYSSSDAGFT DRYDFAENFG KLRDGSVPVK GGWRVYSSGP GIYLRQLVHG ALGITERAGG VVFDPVLAAE DDGTELGIDL AGVHRRVTLH VVAGDAPVRV EVGGVTVEGS EVPAHYRSGG LFVATEQLTG DVDVYVGLDR STLGA
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