| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06370 |
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| Symbol | |
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| ID | 8632274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 719904 |
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| End bp | 722117 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | RCC1 domain-containing protein, alpha-tubulin suppressor |
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| Protein accession | YP_003313431 |
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| Protein GI | 269793976 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.688875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC GATCTGCCGT GCTCCCCTGG TCCTCCGAAA GGTCCCGTCA CATGTCTGTC
GCCGTCCACA GGACGTTCGT CACGTTGGTC CTCGCACTCG TGGCCGCACT GGTCATGCCC
CTGGCAGCAG GGGCCGTCGT GCTGCCCGAC GAGCTCGTGG CCACGGACGA GGTCGACGGG
GCGCCCGTGG TCGAGGAGAT CGACCGAGGG CTCCTCGAAG AACCCACGCC GGTGGAGCTC
CCTGACGCGG TTTCGCCCCC CCCGCCCCAT GCACTGACTC CTGACGACGA GCAGGAAGTC
GTGGCGAGCG CGACGGAAGA CGAAGAGATC ACTGTCGCGG ATCTTGAATC GCCTGATGAG
ACCGATGTGT CGGATGCTCC GGAGCACGCC AAGTACCCGA CGCTGAGCAC CGCGGCGTCG
ACGGGACGAG ACACGCACAT CGCTGCAGGG CATAGTCATG GACTGTATCT CGACTCGAAA
GGACAAATCT GGGCCTGGGG CCTCAATTCG AGTGGTCAAC TGGGCAACGG GACTAGGGCA
AGTTCAACCA CGCCAGTTCC TGTGGATATG ACTGGGGTGA TGGCAAACTC CGAAATGGTC
GCAGTTGCCG CTGGTGCGCG GCACAGTTTG GCGCTGGACT CGGAGGGAAA CGTCTTCGCC
TGGGGGCGGA ACGGCTTCGG TGAGTTGGGC GACGGCACCC GCGTGGATAG GTCGACCCCT
GTCCGCGTGG GCGGGCTCTT GGCTGAACAA CCAGTCGAAA GGATCTCCGG GGGTGGCAAT
ACCACAGACG CAGGGATCCA AGGGAACAGC CTTGCCTTAG GTGCCAACGG TCGGGTGTAC
ACCTGGGGTG CAGGAGAGAG AGGTCGGCTG GGAATCGGCA CGAGTCCGGC ATCAATTGCC
ACGCCGGCCT TGGTAGGTGG ACTCATCGCA GACCAGCACA TCGTCGATGC GTCTTTCGGC
ACAAACAATG CAGTCGTGCT CAGTTCCGAC GGCCGGCTCT TTTCATGGGG TGACGGCTCT
TACGGTGCGC TCGGAAATGG AACGACCACG ACTAGCGCAT CTCCGGTTGC TGTCACGATG
ACTGGAGTGT TGTCCGGTGT GTCCATCTCG CAAGTAGATG CGGGGCAGCT GGGAAGCATT
GCGAGGAGCG TCACCGGGGA GTTATTCACC TGGGGTTGGA ACAATGCTGG TCAGATTGGA
AACGGCACGA CTTCGAACTC GACGGTCCCA ACCCGCGTAG ATATGGGGGC GCTTGAAGCG
CTTGGGAATC GCCCGATTCA GGCCTCTGCC GGTCCAGCGT TTTACATGGC GCTTGGGGCT
GATGGGCGCC TCGCCGCCTG GGGACTCAAC ACTAGCGGGC AGCTTGGCGC GGGAACCAAC
GTGAATGCTT CTCGGCCGGT CGCGGTAAGG GTCGACGGAG TCATGGTCGG GGCGAACATA
ATTCAAGTCA CCAACTCGTC GTCGGGCACG ACGCTTGCGT TGGCTGACGA TGGAAGGGTG
TTCGCCTGGG GAATAGGAGG CAGCGGGGGG CTTGGGAACG GTAGTAGCTC GAACGCGAAT
GCTCCTGTGC AGGTCGGTGG TCTGCGAACG ACAATACAGC CGGAAGACAT CGGCGTGACT
GAAGGTGACG ACGCGAAGTT CATGGCCTCG TCGAATGAAC TGACCGCCAC CGTCCAGTGG
CAGTCGTCGA CCGATGGTGG CCACACGTGG GCACCTATCA TCGGCGAGAT CTCTAGCGAC
CTGATTATCT TGGCGACCAC GCGTGAGATG ACCGGTACGC AGTTCCGGGC CGTCTTCACG
AGCGCGTCGC CGTTTCCCAA CACGGTTGTC TCGCGCGCCG CGACCCTCAC CGTCCAGGAG
CTCGAGGACC CGCCGCTCAT CACCCTCCAC CCGGTCAACC GCGTCCGCTC GCTGGTCGAT
CTCGAGGTCA CCCTCACCGC CGACGCGGTG AGCCCGACCC CCATGACGGT CCAGTGGCAG
TCGTCCGCCG ACGACGGATC CACCTGGGTC GACCTCGTAG GTGCCACGGA CAAGACGCAC
ACCTTCGTCG CGACCGAGGA CCTCGACGGA GCGCTGTTCC GCGCGGTCTT CACCAACCCC
GCCGGGGCCG CCACCACAGA CAGCGCCCTC CTGCAGGTCG TGCTCCGAGC ACCTCAGGCA
CACCTGTCCG TCACCCCGAC AACCCGCCTG GTCACCGAGC CCGAGCTCGC CTGA
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| Protein sequence | MSTRSAVLPW SSERSRHMSV AVHRTFVTLV LALVAALVMP LAAGAVVLPD ELVATDEVDG
APVVEEIDRG LLEEPTPVEL PDAVSPPPPH ALTPDDEQEV VASATEDEEI TVADLESPDE
TDVSDAPEHA KYPTLSTAAS TGRDTHIAAG HSHGLYLDSK GQIWAWGLNS SGQLGNGTRA
SSTTPVPVDM TGVMANSEMV AVAAGARHSL ALDSEGNVFA WGRNGFGELG DGTRVDRSTP
VRVGGLLAEQ PVERISGGGN TTDAGIQGNS LALGANGRVY TWGAGERGRL GIGTSPASIA
TPALVGGLIA DQHIVDASFG TNNAVVLSSD GRLFSWGDGS YGALGNGTTT TSASPVAVTM
TGVLSGVSIS QVDAGQLGSI ARSVTGELFT WGWNNAGQIG NGTTSNSTVP TRVDMGALEA
LGNRPIQASA GPAFYMALGA DGRLAAWGLN TSGQLGAGTN VNASRPVAVR VDGVMVGANI
IQVTNSSSGT TLALADDGRV FAWGIGGSGG LGNGSSSNAN APVQVGGLRT TIQPEDIGVT
EGDDAKFMAS SNELTATVQW QSSTDGGHTW APIIGEISSD LIILATTREM TGTQFRAVFT
SASPFPNTVV SRAATLTVQE LEDPPLITLH PVNRVRSLVD LEVTLTADAV SPTPMTVQWQ
SSADDGSTWV DLVGATDKTH TFVATEDLDG ALFRAVFTNP AGAATTDSAL LQVVLRAPQA
HLSVTPTTRL VTEPELA
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