Gene Sked_06290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06290 
Symbol 
ID8632266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp709379 
End bp711583 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content75% 
IMG OID 
ProductFAD/FMN-dependent dehydrogenase 
Protein accessionYP_003313423 
Protein GI269793968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.945102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG CACACCCGCT CGTCGTCGGC CTGCAGATCC CCGCGGGCGG AGGCGAGGAG 
ACCCTCCCCC TCGCGACGCT CGCCGAAGAG GCCGGGCTCG ACCTCGTCGT CAGCCCGGCC
TCGCCCGAGG GCGGGCTCGA CGACTGGACG GCGCTCGCCT GGGTCGCCGG GCAGACCACC
CGCCTGGACG TCACCCCGGC CGGGCTCGAC GCGACCGCCG GTCCTGCGAC CGTCCTGGGC
CGCGCCGCAG CCTCCCTCGA CCTGCTGACG GGCGGGCGGC TCGACCTCAC GCTCGCCTCG
AGCGACGCGA CAGCCCTCGC CGAGACCGTC GAGGTGGTGC ACGGCATGTG GGCGACCGGC
GAGGACCGGC CGCTCGCCTA CCGCGGCGAG CACCATGTCG TCCCTGCCGC GCCTCGCGGT
CCGTCGCCCG CGCACCCGGT GGGCGTGTGG GTGGCGGGGA CGAGCACCGG GACGCTCGAT
GTCGCCGGGC GACTCGGTGA CGGGTGGAGC GTCCGCTGGG ACCAGCTCGC CGCCACCGAC
CTGGCCGCCG CCTCGGAGGC CGTCGACCAC GCAGCCCGGG CAGCGGGACG CGACCCGCGC
GAGGTCCGTC GCCGGCTCGT CCTGCCGGCA CAGCCGGACG GCGACCACCC GGGGTGGACC
GCGCCCGACG CCGTCGAGCA GCTCGTCGGG CTGGTGGTCG GGCTCGGGTT CAGCACGCTC
GTCGTCGAGA CGGACGACCC CGCTGTCGTC GAGCACGTCG GAGGCGTGGT CTCTCCGGCA
CTGAGGGAGG CCGTCGAGGC TGCTCGCGCC GCTGACGGGA CCACACCGGC CCTCGTCCGG
CCGAGCCGTG TCCGTGCCCG ACGCCACCCC GGCATCCGCT ACGACCAGAT CCCTCCCACG
CTCGTGCAGA TCGCCGTCGA GCCCGGCGAC GTCGGCTACG GCGACGTGCG GTCCACCTAC
ATGCGTGGCG GCTCTCCCGG CCTCGTGCTG CGCCCGCGCT CGGTCCCCGA GGTCGTCGAC
TCGCTCGCCT TCGCCCGCAC GCACGACGTC CCCCTCGCCG TGCGCAGCGG CGGTCACGGC
ATCAGCGGCC GGTCGACCAA CCGCGGCGGG ATCGTCCTCG ACCTCGGGCG CCTGGACGGC
ATCGAGGTGC TCGACCACGC GACCCGGCGG GTGCGGCTGG GCCCCGGGGC ACGCTGGGGC
ACCGTCGCGC GCGAGCTCGC GCCGCTCGGG TGGGCCATCA GCTCGGGCGA CTACGGCGGT
GTGGGCGTCG GCGGGCTCGC GACCTCGGGC GGCATCGGCT ACCTCGTCCG CGAGCACGGG
CTGACCATCG ACCACGTCCG CGCCGTGGAG ATGGTGCTCG CCGACGGCAG CGTCGTCCGC
GCCAGCGACA CCGAGAACAC CGACCTCTTC TGGGCCGTCC GCGGTGCCGG CCACACCGTC
GGCATCGTCA CGTCCTTCGA GCTCGAGGCC GACGAGGTCG GCGACGTCGG CTTCGCCCAG
CTGGTCTTCG ACGCGACGGA CACGGCGGAG CTCCTCGAGG CCTACGGCGC CGTCGTCGAG
GCAGCCCCGC GAGACCTCAC GGCCTTCCTC CTCATGGGGC GCCCGCAGCC CGGGCAGCCG
CCCGTCGCGC AGATCATGGC GGTGGTCGAC TCCCCCGAGC CCGACGTGAT CATCGACCGG
CTGGAGCCGC TCGCCCGCAT CGCCCCGCTG CTCCAGCAGT CGGTCCGGCT CGCGAGCTAC
GACCAGGTCG TCGCGGCGCC CGCACCCGGC CCCCACCAGG GGCAGGGCGA GCCGGTGACC
CGGTCCGCCC TCGCCGACCA CATCACCCCG GCCCTGGCGC GCGCGGCGGC CCAGCTGGTG
CGCAGCGGGC AGAGCTACTT CTTCCAGATC CGGTCCGTCG GCGGGGCCGT GGCCGACGTC
CCGGCCGACG CCACCGCCTA CGCGCACCGC GACGCCGGCT TCAGCCTCGT CGCCATGGGG
GCGAGCCGCG ATCGGCTCGA CGCGCGGTGG GACGCGATGG CCGAGCACTT CACCGGGCTC
TACACGAACT TCGAGACCGA CCAGAGGCCC GAGCGCCTGC TCGACGCCTA CCCGCCGGCC
ACGCTCGAGC GGCTCCGCGA GATCAAGCAG CGCCACGACC CCGACGACGT CTTCCGTGAC
AACTTCGCCC TCGGTGCGCC CGCCGTGACC TCCGCCGCTG GCTGA
 
Protein sequence
MDYAHPLVVG LQIPAGGGEE TLPLATLAEE AGLDLVVSPA SPEGGLDDWT ALAWVAGQTT 
RLDVTPAGLD ATAGPATVLG RAAASLDLLT GGRLDLTLAS SDATALAETV EVVHGMWATG
EDRPLAYRGE HHVVPAAPRG PSPAHPVGVW VAGTSTGTLD VAGRLGDGWS VRWDQLAATD
LAAASEAVDH AARAAGRDPR EVRRRLVLPA QPDGDHPGWT APDAVEQLVG LVVGLGFSTL
VVETDDPAVV EHVGGVVSPA LREAVEAARA ADGTTPALVR PSRVRARRHP GIRYDQIPPT
LVQIAVEPGD VGYGDVRSTY MRGGSPGLVL RPRSVPEVVD SLAFARTHDV PLAVRSGGHG
ISGRSTNRGG IVLDLGRLDG IEVLDHATRR VRLGPGARWG TVARELAPLG WAISSGDYGG
VGVGGLATSG GIGYLVREHG LTIDHVRAVE MVLADGSVVR ASDTENTDLF WAVRGAGHTV
GIVTSFELEA DEVGDVGFAQ LVFDATDTAE LLEAYGAVVE AAPRDLTAFL LMGRPQPGQP
PVAQIMAVVD SPEPDVIIDR LEPLARIAPL LQQSVRLASY DQVVAAPAPG PHQGQGEPVT
RSALADHITP ALARAAAQLV RSGQSYFFQI RSVGGAVADV PADATAYAHR DAGFSLVAMG
ASRDRLDARW DAMAEHFTGL YTNFETDQRP ERLLDAYPPA TLERLREIKQ RHDPDDVFRD
NFALGAPAVT SAAG