Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06070 |
Symbol | |
ID | 8632244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 686394 |
End bp | 688064 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | predicted hydrolase of the metallo-beta-lactamase superfamily |
Protein accession | YP_003313401 |
Protein GI | 269793946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.258358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.112018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCT CAGCGCCCCC CGCGCTCCCC CGCGGTGGCC TGCGCATCGT GCCGCTCGGC GGCCTCGGCG AGGTCGGCCG CAACATGACC GTGTTCGAGC ACGAGGGCAA GCTGCTCATC GTCGACTGCG GCGTCCTCTT CCCCGAGGAG CACCAGCCCG GCATCGACGT GATCCTCCCC GAGTTCACCT GGATCCGCGA CCGCCTCAAG GACGTCGTCG CGATCGTCCT CACCCACGGC CACGAGGACC ACATCGGTGG TGTCCCGTAC CTGCTCAAGG AGCGCGCGGA CATCCCCGTC ATCGGGTCCA AGCTGACGCT CGCCTTCATC TCGGCGAAGC TCAAGGAGCA CCGCATCCGC CCGCGCACCA TCGAGGTCGA GGCCGGCGGC TCCTCCAAGC AGGGCCCCTT CGACCTCGAG TTCATCGCGG TCAACCACTC CATCCCCGAC GCCCTCGCCG TCGCAATCCG CACGCGTGCG GGCCTGGTCA TCAACACCGG TGACTTCAAG ATGGACCAGT TCCCCCTCGA CTCGCGCATC ACGGACCTCA ACCACTTCGC CCGCCTGGGC GAGGAGGGCG TGGACCTGTT CATGACCGAC TCGACCAACG CCGAGGTCCC CGGCTTCACG ATGTCGGAGC AGGACCTCGT CCCCGCCATC GAGCAGGTGT TCCGCACGGC CCCGCGCCGC GTCATCGTGT CGAGCTTCGC GAGCCACGTG CACCGCATCC AGCAGATCCT CGACTCGGCG CACGAGGCCG GCCGCAAGGT CGCGTTCGTC GGCCGCTCGA TGGTCCGCAA CATGGGGATC GCGGAGGAGC TCGGCTACCT CAAGATCCCC CGCGGCCTGG TCGTCGACCT CAAGAAGCTC GAGTCGATGC CGCCCGAGAA GATCTGCCTC GTGTGCACCG GCTCGCAGGG CGAGCCGATG GCTGCGCTGT CGCGCATGGC CAAGAGCGAG CACGTCATCA AGGTCGGCGA GGGCGACACC GTCCTCCTCG CCAGCTCGCT CATCCCGGGC AACGAGAACG CGATCTACCG CGTCATCAAC TCGCTCACCG ACCTCGGCGC GACCATCGTG CACAAGGGCA ACGCGAAGGT GCACGTGTCC GGCCACGCCT CGGCCGGCGA GCTCGTGTAC TGCTACAACA TCGTCAAGCC GCGCAACGTC ATGCCGATCC ACGGCGAGTC CAAGCACCTG CGTGCCAACG GCGCGCTGGC GGAGAAGACG GGCGTGCCGT CGAACAACGT CGTCATCGCC CAGGACGGCA CGGTCGTCGA CCTCGTCAAG GGCAAGCTGT CGATCGTCGG CAAGGTCCCC GCCGGCTACG TGTACGTCGA CGGCCAGACC GTCGGCACCG CGACCGAGGA CACCCTCGCC GAGCGCCGTG CACTCGGCTC CAAGGGCATC GTCACCGTCC TCGCCCTCGT CGACCTCGAC CTCGGCGTCC TCGCCGAGAC CCCCGAGTTC ATCACCCGCG GGTTCGTGCA CGACGGCCAC ACCTTCGACG ACGCGGTCGT CGAGATCGAG AAGGCCCTCG CGCAGATCCC CAAGAAGGAC GTCGGCGACA TCGACCGCCT CGAGGCGACC ATCGCCAAGT CCGTCGCCCG CTGGCTCCAG CGCAAGTACC GCCGCGAGCC GCTCGTCAAC GCCATCGTCG TCGACGCGTG A
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Protein sequence | MNLSAPPALP RGGLRIVPLG GLGEVGRNMT VFEHEGKLLI VDCGVLFPEE HQPGIDVILP EFTWIRDRLK DVVAIVLTHG HEDHIGGVPY LLKERADIPV IGSKLTLAFI SAKLKEHRIR PRTIEVEAGG SSKQGPFDLE FIAVNHSIPD ALAVAIRTRA GLVINTGDFK MDQFPLDSRI TDLNHFARLG EEGVDLFMTD STNAEVPGFT MSEQDLVPAI EQVFRTAPRR VIVSSFASHV HRIQQILDSA HEAGRKVAFV GRSMVRNMGI AEELGYLKIP RGLVVDLKKL ESMPPEKICL VCTGSQGEPM AALSRMAKSE HVIKVGEGDT VLLASSLIPG NENAIYRVIN SLTDLGATIV HKGNAKVHVS GHASAGELVY CYNIVKPRNV MPIHGESKHL RANGALAEKT GVPSNNVVIA QDGTVVDLVK GKLSIVGKVP AGYVYVDGQT VGTATEDTLA ERRALGSKGI VTVLALVDLD LGVLAETPEF ITRGFVHDGH TFDDAVVEIE KALAQIPKKD VGDIDRLEAT IAKSVARWLQ RKYRREPLVN AIVVDA
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