| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_05880 |
|---|
| Symbol | |
|---|
| ID | 8632225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 665581 |
|---|
| End bp | 667017 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_003313382 |
|---|
| Protein GI | 269793927 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.927545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCC TGATCGGACT CGTGGTGATC GTCGTGATCA CCGCGGCGAC CGGATACTTC
GTCGCCCAAG AGTTCGCCTA CATGGCCGTC GACCGCTCCC GGTTGAACGC CCGCGCCGCA
GCAGGTGACG CCGGCGCCAA GCGCGCCCTC GCCGTCACCC GGCGGACCTC CTTCATGCTG
TCCGGTGCCC AGCTGGGCAT CACCGTGACC ACCCTGCTCG TCGGCTACGT GGCCGAGCCG
CTCGTCGGCC AGGCGCTCGG CGACGCCCTC GGTGGCGTCG GTGTGCCCAC CGGCGTCGGC
ATCGCGGTCG GCACCGTCAT CGCGCTGGTC TTCTCGACCT TCGTGCAGAT GCTCTTCGGC
GAGCTGTTCC CCAAGAACCT CGCCATCGCC CGGCCCGAAC CGGTCGCACT GTGGCTCGCG
ACGTCCACGA CCGTCTACCT CAAGGCCTTC GGCTGGCTCA TCCGGGTGTT CGACCAGGCG
TCGAACCTGC TGCTGCGCGC CCTGAAGATC GAGCCGGTGC ACGACGTCGA GCACTCCGCG
ACCGCTCGAG ACCTCGAGCA CATCGTGGCC GACTCCCGCG TCAGCGGAGA CCTGCCCGCG
GAGCTCTCCG TGCTGCTCGA CCGCATCCTC GACTTCCCCG AGCAGGACGC CGAGCACGCG
ATGATCCCGC GCGCCCGCGT CGACGTCCTC CACGAGGACG ACACCCTCAC GCACGTCCGC
GAGACCATGG CCAGCGGCCA CTCCCGCTAC CCCGTGCTGG CGCTCGACGA GCAGGTCCTC
GGGGTCGTGC ACCTCGACGA CGTGCTCCGG ACGACGAGGG GCGGCGAGAC CCCGGTCACG
GAGCTCATGC GCCCTGCCGT CATGGTCCCC ACGACCATGG CGCTCCCCGA CGCCCTCAAC
CACCTCACGT CGACGCACAA CCAGCTGGCC TGCGTCATCG ACGAGTACGG CGGCTTCGCC
GGCGTGCTCA CCGCCGAGGA CCTCGCGGAG GAGCTGGTCG GCGAGATCAC CGACGAGCAC
GACCCCGCCA CCCCGACGAT CGCCCCGCGC GACGACGACG GCCGGTGGGT CATGGCCGGT
GACGTGCACA TCGACGAGGT CGAGCGCGCC GTCGACCACG ACCTCCCGCG CGGTGACTAC
GAGACGATCG CCGGGCTCGT CATCGCCGAG CACGGGTCGC TGCCGGACGT CGGCACGACG
GTGCTGGTCC AGCTGCCGCT GGACCGCTCC GACCTCGCCG ACGCCGGCGA GCCGGAGCCC
GTCTGGCTGT CGGCCGAGGT GCTCGACGTG GACCGGCACG TGCCGTCCCT CGTCCGGGTC
CTCGTCCCTG CCGAGCCACC CGAGCCCGCC CCGGAGCCTG AGCTCGAGGG CGCCGCGCAC
CGGCAGCCGG TCGCCGACCG CGCCGAACCC AGCACCGACG GAGAGGACGC CCGATGA
|
|---|
| Protein sequence | MTLLIGLVVI VVITAATGYF VAQEFAYMAV DRSRLNARAA AGDAGAKRAL AVTRRTSFML
SGAQLGITVT TLLVGYVAEP LVGQALGDAL GGVGVPTGVG IAVGTVIALV FSTFVQMLFG
ELFPKNLAIA RPEPVALWLA TSTTVYLKAF GWLIRVFDQA SNLLLRALKI EPVHDVEHSA
TARDLEHIVA DSRVSGDLPA ELSVLLDRIL DFPEQDAEHA MIPRARVDVL HEDDTLTHVR
ETMASGHSRY PVLALDEQVL GVVHLDDVLR TTRGGETPVT ELMRPAVMVP TTMALPDALN
HLTSTHNQLA CVIDEYGGFA GVLTAEDLAE ELVGEITDEH DPATPTIAPR DDDGRWVMAG
DVHIDEVERA VDHDLPRGDY ETIAGLVIAE HGSLPDVGTT VLVQLPLDRS DLADAGEPEP
VWLSAEVLDV DRHVPSLVRV LVPAEPPEPA PEPELEGAAH RQPVADRAEP STDGEDAR
|
|---|
| |