| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_05500 |
|---|
| Symbol | |
|---|
| ID | 8632187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 611404 |
|---|
| End bp | 611988 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | PAS domain S-box |
|---|
| Protein accession | YP_003313344 |
|---|
| Protein GI | 269793889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.414164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCA CCGTCGCTGT CCGACCCACA GAGGTCCGTC CTGCAGGGGA CCGCCTGACG
GCCGTCCGGC CCACAGGGGT CGAGCGCGTC CTCGCGGACG ACCAGCTGAT CGTCAGCAAG
ACCGACCTCA AGGGCCGGCT CACCTACACG AACGACGTGT TCCTCACGAT CTCCGCGATC
GACGAGCCCG ACGCCATCGG TCGCCCGCAC AACCTCATCC GGCACCCGGA CATGCCCCGC
GGCATCTTCC GGCTGCTCTG GGACACGCTC CGCTCTGGCG AGGAGCTGTT CGCGTACGTG
CAGAACCTGG CTCTGGACGG TGCCCACTAC TGGGTCTTCG CGCACGTCAC CCCGTCGCGC
GACGCCCAGG GCCGCACCGT CGGCTACCAC TCCACGCGCC GCGCCGTGAG CGCGTCGGCG
CGCGCCCAGG TCGAGCGCCT GTACGCCGAC ATGCGCCGTG TCGAGGCCCA GCACAGCGGA
CGCGGCGCCG ACGAGGCGTC CCTCACCTGG CTGCGCGAGC AGCTCGCCGC CCAGGGCCAG
ACCTACAGCG AGTGGCTGTG GAGCGTCGCG GGAGGTGCCC GATGA
|
|---|
| Protein sequence | MSSTVAVRPT EVRPAGDRLT AVRPTGVERV LADDQLIVSK TDLKGRLTYT NDVFLTISAI
DEPDAIGRPH NLIRHPDMPR GIFRLLWDTL RSGEELFAYV QNLALDGAHY WVFAHVTPSR
DAQGRTVGYH STRRAVSASA RAQVERLYAD MRRVEAQHSG RGADEASLTW LREQLAAQGQ
TYSEWLWSVA GGAR
|
|---|
| |