Gene Sked_05340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05340 
Symbol 
ID8632171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp590085 
End bp591173 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content73% 
IMG OID 
Productankyrin repeat protein 
Protein accessionYP_003313328 
Protein GI269793873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG AGGAGGCTCC TCCCACGATC TCGGGCTACT GGGTGGAGAA GGCGTCCGCC 
GAGGAGATCT TCGCGGTCTA CGACCCGACG ACGTGGCCGA CCTACCGGGA CCGCTCCGGG
AGGTCTCTCC TGACGAGCGC CGTCGGACGG CACGACCCGG AGACCCGCGC GCTCCTCACG
CACCGCCTGC TCGACGACGG CGCCGACCCG AACCCGAGGG TCTCGGAGGG GTACACCCTG
CTGCACGTCC TGCTGTCGCG GGCACGGGAC CCCGAGATCG ACCCGCCGCT GGTCCGCCAC
CTCATCGCCG CCGGTGCGGA CATGAACAAG GCAGCCGGGC GTCACGGCCT CCGCCCCGTC
GAGGACGTCG ACCACCCGAA GCTCTCCCCG GCGGAGCTCG AGCCGTACTA CCGGGCGTTC
TTCGACCAGC CCGGGCTCGA GCTGCTCGAG AAGAACCGCC GCGGGCGCTC GGTGCTCGAC
CACGCACGGC TCTGGCGCCG CAAGCCCCAG CTGCTCGAGC ACGTCATGGC CTATCTGCAG
CAGATCGACC AGGCGCCCGT CGACGAGCCG CTCACCCAGA CCGCAGCGTG GCAGACGCTC
GACGAGATCC TCGCGAGGTA CTCACCAGCG GACGCCGCGG CGGTCGACGC GGAGACGGGC
GACAGCCTGC TGCACGCCGT CCTGCGCAAC GCCGACCTCA CCGTGCGGAC AGCTCTCGTG
CCTCGGCTGG TCGCCGACGG CGCCGACGTC ACGCTGCGCA CCGCGACCGG CGAGAGCGTG
CTGCACCTCG CGCTCGCCCG GCACGGAGAG CGCGAGGCCG AGCAGGACGG CCGCGTGGTC
GCTGCGTTGC TGGACGCAGG TGCTGACATC AACGCCGTGT CGGACGCGCG CAGCGTGCCG
CTCACGACCC TCGCGCTCCA GGGGAGCTTC ATGGAGTCCT CGGTCGGCCC GCTCTACGAC
GCGCTGCTCG CAGCTCCCGG GCTCGACCTG GACGTCGTCG TGGCCAAGGG GCGGACCGTG
CTCGAGGCGG TGCAGAAGGC CGTGCCGCCG CGCCCCGAGC TGCTCGCGCG GCTCGAGGCG
CGGGGCTGA
 
Protein sequence
MSAEEAPPTI SGYWVEKASA EEIFAVYDPT TWPTYRDRSG RSLLTSAVGR HDPETRALLT 
HRLLDDGADP NPRVSEGYTL LHVLLSRARD PEIDPPLVRH LIAAGADMNK AAGRHGLRPV
EDVDHPKLSP AELEPYYRAF FDQPGLELLE KNRRGRSVLD HARLWRRKPQ LLEHVMAYLQ
QIDQAPVDEP LTQTAAWQTL DEILARYSPA DAAAVDAETG DSLLHAVLRN ADLTVRTALV
PRLVADGADV TLRTATGESV LHLALARHGE REAEQDGRVV AALLDAGADI NAVSDARSVP
LTTLALQGSF MESSVGPLYD ALLAAPGLDL DVVVAKGRTV LEAVQKAVPP RPELLARLEA
RG