Gene Sked_04990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04990 
Symbol 
ID8632136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp552488 
End bp553585 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content74% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003313294 
Protein GI269793839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCG CGATCCACCG GACGTCGCTC CAGCTCCGCA GCCGCGTCCG TCAGGGCAGC 
ATCCGGGTGC GCTCGGGCGC GGGGCCGATC CTCACCGCCG GCATCGCGGT CAGCCTCTCG
TACTGGATCG CACACCTGCT GCTCGGGCAC CCCTTCCCGT TCTTCGCGCC GGTCTGCGCC
TGGATCTGCC TCGGCTTCAC GGCGGACCGC AACATGCGGC GGGTGGCCGA GGTCGGCATC
GGCGTCGCGA TCGGCGTGGG CCTCGGCGAG GCGATCGCGT CGTTCATCGG GGCCGGGGCG
ATCCAGATCG GTGTCGTGCT CGTGGTGTCC GCGCTCGTCG CGCGGTTCAT CGACCGCGGG
GCGCTGCTCA CCACCCAGGC GGGCGTCCAG TCGATCGTCA TCGTCGGGCT CCCCGTGATG
TCGACCGGTG GAGGCGGCGG CCTGGGGCGC TGGACCGACG CACTCGTCGG GGCAGCCGTC
GCCTTCGTGG TGGCGGCGCT GACCCCGGGC GACCCGCGGC GCCTGCCGCG CAGGCTCGGC
GGCGAGGGGC TCTCGGAGCT GGCTCGCACC TTCGAGGAGA TCGCCCACGG GATGCGCACG
GGCGAGGCCG CCGACCGCGA GGCGGCGCTG GTCCGCGGCC GAGCCTCCGA GCCGGCGCTC
GACGAGTGGC AGTCGGTCAC CAAGGACGCC CTCGGCACGG CCAAGGTCAC GGCGACGGGA
CGGCGGTACC GGGCCGAGCT CACCGTCATG GGGCGCACCG CCATGCTCGG AGACCGGACC
ATGCGGACCG TGCGGGTGAT CGCGCGTCGC GCGCTCAGCC TGCCGACCGG GCCCGAGGTC
GACCGGCTCG CGCAGCTCCT CGACGACCTC GCCAAGGCCA CCCACCTGCT CGCCGAGAAC
GTGGCCTCGG GGACGGAGCC GGCGGTCGCC CGCGAGATGC TCCTCGACGT CGCACACGAG
GCGCACCCGG GGCTGCTCGG CACGGGCGAC TGGCAGGTGC AGTCGATCAC CCTGATCCTG
CGCTCGGCCA TCGTCGACCT GTGCGAGACG GCGGGCGCGA CGCCCGGTGA GGCCCGCGAC
GCGCTCGCCC CGATGTAG
 
Protein sequence
MTSAIHRTSL QLRSRVRQGS IRVRSGAGPI LTAGIAVSLS YWIAHLLLGH PFPFFAPVCA 
WICLGFTADR NMRRVAEVGI GVAIGVGLGE AIASFIGAGA IQIGVVLVVS ALVARFIDRG
ALLTTQAGVQ SIVIVGLPVM STGGGGGLGR WTDALVGAAV AFVVAALTPG DPRRLPRRLG
GEGLSELART FEEIAHGMRT GEAADREAAL VRGRASEPAL DEWQSVTKDA LGTAKVTATG
RRYRAELTVM GRTAMLGDRT MRTVRVIARR ALSLPTGPEV DRLAQLLDDL AKATHLLAEN
VASGTEPAVA REMLLDVAHE AHPGLLGTGD WQVQSITLIL RSAIVDLCET AGATPGEARD
ALAPM