Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_04830 |
Symbol | |
ID | 8632120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 539776 |
End bp | 541074 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | anaerobic c4-dicarboxylate membrane transporter family protein |
Protein accession | YP_003313279 |
Protein GI | 269793824 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.664542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGTCG TCGAGCTCGC CGTTGTCCTC GCTGCGATCG TCCTGGGCGC GCGCCTCGGC GGGATCGGCA TCGGGTACGC GGGCGGTGCC GGGGTGCTCG TCCTCGGCCT GCTGGGCGTG AGCCCGGGGA CCGCGCCCTT CGACGTCATC TCGATCATCA TGGCGGTCAT CGCCGCGATC GCCGCCATGC AGGTGGCCGG GGGCATGGAC CACCTGGTGC ACCTCGCCGA CCGGCTGCTG CGGCGCCGGC CGCAGCAGAT CACGTACTAC GCCCCGCTCG TCACCTACGG CATGACCCTC ATGGCCGGGA CGGGGCACAC GGCCTTCTCG ACGCTCCCGG TGATCTCCGA GGTGGCCAAG GAGAACGGCG TCCGGCCGTC GCGCCCGCTG TCGATCGCGG TGGTGGCCTC GCAGGTCGCC ATCACGGCGT CGCCGGTCTC GGCGGCGGTG ATCTTCGTGG CGGCGGTCCT CGAGCCCTTC GGCGTCGACT ACCTGCAGGT CCTCGCGGTC TCGATCCCGT CCACCCTGCT CGCCGTGGTC CTGGCCTCGC TCGTCACCAA CCGGCTGGGC AAGGACCTCG CGGACGACGA CGAGTACCAG GCGCGCCTCG CACGCGGTGA GATCACCTTC CGGCCGCAGA CGGAGTACGT GGCACGCCCC GGTGCCCGGC GGTCCGTCGT GATCTTCCTC GTCGGGATCG TGGCGGTGAT GTCGTACGCG ACCGCCGTCA GCGAGAACGT CGGCCTCATC GCCGACCCGG CCCTCGCCCG CAACGAGGCG ATCCTCGTCA TCATGCTCAC GGTCGCGACC GTCATCACCG TCACCTGCGG CGTGAGCACC CCGAAGATCC TCGAGATGTC GACCTTCCGG TCGGGGATGA GCGCGTGCGT CTGCGTCCTC GGTGTCGCGT GGCTCGGCGA CACCTTCGTC CAGCACAACC TCGAGACTAT CCAGTCGGTC TCGGGCGGCG CCCTCGACGC ACAGCCCTGG CTGCTCGCCG TGGTGCTGTT CTTCGCGTCG GCGCTGCTCT ACTCGCAGGC GGCGACGGCG TCGGCCCTCA TGCCCGCGGC TCTCGCCCTC GGCGTCAGCC CGCTGACGGC GGTCGCCTCC TTCGCGGCCG TGTCGGCGCT GTTCGTCCTG CCGACCTACC CGACGCTGCT CGCGGCGGTC GAGCTCGACG ACACCGGCTC GACGAAGATC GGGAAGCTCG TGTTCAACCA CCCGTTCATC GTCCCGGGGA CCCTCACCAT CGTCCTCGCG GTGCTGCTGG GCTTCGCCGT CGGGAGCGTC GTGCTCTAG
|
Protein sequence | MVVVELAVVL AAIVLGARLG GIGIGYAGGA GVLVLGLLGV SPGTAPFDVI SIIMAVIAAI AAMQVAGGMD HLVHLADRLL RRRPQQITYY APLVTYGMTL MAGTGHTAFS TLPVISEVAK ENGVRPSRPL SIAVVASQVA ITASPVSAAV IFVAAVLEPF GVDYLQVLAV SIPSTLLAVV LASLVTNRLG KDLADDDEYQ ARLARGEITF RPQTEYVARP GARRSVVIFL VGIVAVMSYA TAVSENVGLI ADPALARNEA ILVIMLTVAT VITVTCGVST PKILEMSTFR SGMSACVCVL GVAWLGDTFV QHNLETIQSV SGGALDAQPW LLAVVLFFAS ALLYSQAATA SALMPAALAL GVSPLTAVAS FAAVSALFVL PTYPTLLAAV ELDDTGSTKI GKLVFNHPFI VPGTLTIVLA VLLGFAVGSV VL
|
| |