Gene Sked_04300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04300 
Symbol 
ID8632067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp481411 
End bp482469 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003313230 
Protein GI269793775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG GCGACGACTC TGCCGAGCCC GTGGCCAGGC GTGCGGCACG GCCTCGCTCT 
GGCCCGTCGA TCGGTGACGT CGCCGCCCTC GCCGGGGTGT CTGCCCAGAC CGTGTCACGC
GTGTCCACGG GGGCGGAGCG CGTCCGGCCG GAGACCCGCG AGCGCGTGCT GGCCGCGATG
GACGAGCTCG GGTACTCCCC CAACTACGCG GCGCGGGCGC TGCGGTACGC GCACTTCGAC
ACGATCGGGG TCATCGCCCA CCGTCTCGCC CGGACCGGAG AGGCGCGCAC CTTCGAGGCA
GTCGTCGACG CCGCCCGTCT CGAGGGGTAC ACGGTGACGC TGGTCGACGT GCAGTCACCG
TCGTCGGACG AGATGACCGC GGCGGCGGCC CGGTTGACGC ACCAGGCGAT CGACGGGCTG
GTGATCATCC GGGCCGAGGA GCAGAGCCCG GAGACGCTGG CCCTGCCCGC CCGGATGCCC
GTGGTGGTCT CGGACTCGCG CTTCGTCACC CACCACCCCG CGGTGGCGAC CGACCAGGCG
GCCGGGACGC GGGCGGCCGT GGAGCACCTG CTGGGCCTGG GCCACGAGAC CGTGCACCAC
CTCGCCGGGC CGGCGGACTC CTCCCCCGCC GGGCTGCGGG TCGACTCGTG GCGCGCCTGC
CTCGTCGCGG CCGGTCGGCC GGTGCCCGAG GTGGTGCGGG GCGACTGGTC GGCGACCTCC
GGCTACGAGC AGGGTCTGCG CATCGCGGCC GACCCCGAGG TCACGGCGGT CTTCTGCGCC
AACGACGAGA TGGCGGCCGG CCTGTACCGG GCGCTGCACG AGACCGGCCG GAGCATCCCG
GAGGACGTGT CCGTGGTGGG CTTCGACGAC ATCCCGCTCG CCGAGCACCT CTGGCCCCCG
CTGACCACCG TCGCGCAGGA CTTCCACCAG ATCGGCCGCG AGCTGGTGGA CCTCCTGCTG
CGTCAGGTCC GCGACGGGGA GAGCCTCACC GACGTGCGCT CGCTGCTGCC GGTCGAGCTC
GTGGTCCGGG CGAGCACGGC CCCACCGCGC GCCCGCTGA
 
Protein sequence
MTSGDDSAEP VARRAARPRS GPSIGDVAAL AGVSAQTVSR VSTGAERVRP ETRERVLAAM 
DELGYSPNYA ARALRYAHFD TIGVIAHRLA RTGEARTFEA VVDAARLEGY TVTLVDVQSP
SSDEMTAAAA RLTHQAIDGL VIIRAEEQSP ETLALPARMP VVVSDSRFVT HHPAVATDQA
AGTRAAVEHL LGLGHETVHH LAGPADSSPA GLRVDSWRAC LVAAGRPVPE VVRGDWSATS
GYEQGLRIAA DPEVTAVFCA NDEMAAGLYR ALHETGRSIP EDVSVVGFDD IPLAEHLWPP
LTTVAQDFHQ IGRELVDLLL RQVRDGESLT DVRSLLPVEL VVRASTAPPR AR