Gene Sked_03790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03790 
Symbol 
ID8632017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp423410 
End bp424102 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID 
Productpredicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
Protein accessionYP_003313180 
Protein GI269793725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.288103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.160551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC CCCTCAAGGT CGACATCTGG TCCGACATCG CGTGCCCGTG GTGCTACGTC 
GGCAAGCGCC GCTTCGAGGA GGCCCTCGTG GCCTTCGACG CGTCGGGCGC CGCCCGGCCC
GTCGAGATCG AGTACCACTC CTTCGAGCTC GCGCCCGACA CCCCGGTGGA CTTCGACGGC
TCCGAGGTCG ACTTCCTCGC CGGGCACAAG GGCATGCCGC GCGAGCAGGT CGTCCAGATG
CTCGGGCAGA TGACCGAGGT CGCCGCGTCG GTCGGCCTCG ACTACGACTT CGACGCCCTC
CAGCACACCA AGACCCTCAA GGCCCACGAG CTGCTGCACC ACGCGAAGGC GCACGGCCTC
CAGGGCGAGC TCAAGGAGCG CCTGCTCCGC GCGTACTTCG TCGAGGGTCG TCACCTCGGC
CGCATCGACG ACCTCGTCGA GCTCGCGGCA GAGGTGGGCC TCGACGCCGA CGCCGCCCGC
GCCGTCCTCG AGTCGGGCGA GCTCGCGCCG GCCGTTGCCC AGGACATCGC GCAGGCCCAG
GCCTACGGGA TCCAGGGTGT GCCGTTCTTC GTGGTCGACG GGAAGTACGG CGTGAGCGGC
GCGCAGGAGC CGGCCGTGTT CGTCCAGGTG CTCGAGAAGG CCGCGTCCGA CGCGGACGAG
CCCGCTGACC AGGCGACCTC CACCCGTGGC TGA
 
Protein sequence
MTAPLKVDIW SDIACPWCYV GKRRFEEALV AFDASGAARP VEIEYHSFEL APDTPVDFDG 
SEVDFLAGHK GMPREQVVQM LGQMTEVAAS VGLDYDFDAL QHTKTLKAHE LLHHAKAHGL
QGELKERLLR AYFVEGRHLG RIDDLVELAA EVGLDADAAR AVLESGELAP AVAQDIAQAQ
AYGIQGVPFF VVDGKYGVSG AQEPAVFVQV LEKAASDADE PADQATSTRG