Gene Sked_03740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03740 
Symbol 
ID8632012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp417907 
End bp420204 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content73% 
IMG OID 
Productbeta-glucosidase-like glycosyl hydrolase 
Protein accessionYP_003313175 
Protein GI269793720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.653977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCTGCCGTA CCGCGACGCC ACCCTGCCGA TCCCGGAGCG GATCGAGGAC 
CTGCTGAGCC GCATGACGCT GCCCGAGAAG GTCGGGCAGA TGATGCAGCT GGACTCGCGG
GACGGCGTCG ACGGGCTCGT CGCCGACTAC CACGTCGGCT CGATCCTCCA CACCTCCCCG
GAGACCCTGA ACCGCGCGAT CGACCTCGCG GAGCAGACGC GTCTCGGCAT CCCGCTGCTC
GTCGGCGAGG ACTGCATCCA CGGCCACTCC TTCTGGCCCG GCGCGACCAT CTTCCCGACA
CAGCTGGGCA TGGCGGCCAC CTGGGACGCC GACCTCGTCG AGCGCGCCGC CCGCGTGACC
GCCGTCGAGG TCTCGGCCAC CGGCATCCAC TGGACCTTCT CGCCGGTCCT GTGCATCACC
CGCGACCTGC GCTGGGGCCG CGTCTCCGAG ACCTTCGGCG AGGACCCCTT CCTCATCGGC
GAGCTCGGGT CTGCCATGGT CCGCGGCTAC CAGGGCGACG GCCTCGACGA CCCGACCGCG
ATCCTCGCCT GCGCCAAGCA CTTCGCCGGG TACTCCGAGA CCCAGGGTGG TCGCGACGCG
AGCGAGGCCG ACATCAGCCG GCGCAAGCTG CGCTCGTGGT TCCTGCCGCC CTTCGAGCGC
GTGGCCCGCG AGGGCTGTCG GACCTTCATG ATCGGCTACC AGTCGATGGA CGGCGTCCCG
ATCACCGCCA ACCGGTGGCT GCTCGACGAC GTGCTCCGCG GCGAGTGGGG CTACACCGGC
ACGCTCATCA CCGACTGGGA CAACGTCGGT CGCATGGTGT GGGAGCAGGA GGTCTGCGCC
GACGTCGCCG AGGCCTCGGC CCGCGCCGTC ACCGCCGGAA ACGACCTCGT CATGACGACG
CCCGGGTTCT TCCAGGGGGC CCAGGACGCG ATCGCGCAGG GGACGCTCAC GGAGGGCCAG
GTCGACGAGG CCGTGCGCCG CATCCTCCTG CTGAAGTTCG AGCTCGGGCT CTTCGAGGAC
CCGCGCCGCC CCGACGAGGC CCGCCAGGCC GAGGTCGTCG GCGTCGCCGC GCACGCCGAC
CTCAACCTCG AGATGGCCCG CCGGTCCCTC GTCCTGCTCT CGAACGACGG CACGCTCCCG
ATCGACGGCG GGTACGTGGC GGGCTCCGAC GGCCGTGCGG TCGCCCCGGA GGGCGCCGCG
CGCCCAGCGC GACGGATCGC CGTCGTCGGA CCCAACGCCG ATGACCAGCA CGCGCAGCTC
GGCGACTGGG CCGGGGCGTC CGGGCAGGTC GACTGGATGC CCGACGGTCA CCCGCGCGAG
CTCACCGAGA CAGTCCTCGA CGGCCTGCGC CGCGTCGTCC CGGACTGCTG GACGGTCACC
CACGACCGAG GCGCCGACAT CGCCGTCATG GGCCCGGACC CCGAGGGCGA GACCTTCCCC
GACGGACAGC CGCGCCCGCA GGTCGTCCAC CACGCGGCGC CGGACGAGCA GATGATCGCC
GACGCCGTCG CGAGCGCCCG CGAGGCCGAC TACGTCGTCG CCGTGGTCGG CGACACCATC
GGACTCATGG GCGAGGGGCG CTCGACCGCG ACACTCGAGC TCGTCGGCGC GCAGGTCGCC
CTGCTCGACG CGCTCGCCGA GACCGGGACG CCGACGGTCG TCGTGGTCGT CTCCTCGAAG
CCGCTCGTGC TTCCCGCCTC CGCCCTCGGC GCGGCCGCGG TGGTCCAGGC CTTCAACCCG
GGGATGCGCG GTGGCCGCGC CGTCGCCGAG CTCGTGCTCG GGCTCGTCGA GCCCTCGGGG
CGGCTGCCGG TGACGGCTGC GCGGCACGTC GGGCAGCAGC CGATCTACTA CAACCAGCTG
CGTGGCCAGC ACGGAGACCG GTACGCCGAC CTCACCCAGG ACCCGCAGTT CGCCTTCGGC
GAGGGCCTCA GCTACACGAC GGTCGAGTAC TCCGACCTGG TCGTGGCCGT CCCGGAGGTC
ACGGAGACGG GTACGGTGCG CGCCGAGGTC ACGCTGACCA ACACCGGGGC ACGGCCGTCC
CGTGAGACCG TCCAGGTGTA CGTGCGCGAC CTCGTCACCT CGGTCACCTG GGCGACCAAG
GAGCTCAAGA CCTTCCGGCA GGTCGACGTG CCGGCGGGGG AGAGCGTCAC GGTCGCCCTC
GAGCTCCCGG TCGCCGACTG CACCCTGGTG ACGTCCGACG AGCGCCGCGT CGTCGAGCCC
GGCGACTTCG ACCTCCTCGT CGGCCCGAGC TCACGCGACG CAGCCCTCCT CGCAGCCCGC
TTCACGGTCA CCGCCTGA
 
Protein sequence
MTETLPYRDA TLPIPERIED LLSRMTLPEK VGQMMQLDSR DGVDGLVADY HVGSILHTSP 
ETLNRAIDLA EQTRLGIPLL VGEDCIHGHS FWPGATIFPT QLGMAATWDA DLVERAARVT
AVEVSATGIH WTFSPVLCIT RDLRWGRVSE TFGEDPFLIG ELGSAMVRGY QGDGLDDPTA
ILACAKHFAG YSETQGGRDA SEADISRRKL RSWFLPPFER VAREGCRTFM IGYQSMDGVP
ITANRWLLDD VLRGEWGYTG TLITDWDNVG RMVWEQEVCA DVAEASARAV TAGNDLVMTT
PGFFQGAQDA IAQGTLTEGQ VDEAVRRILL LKFELGLFED PRRPDEARQA EVVGVAAHAD
LNLEMARRSL VLLSNDGTLP IDGGYVAGSD GRAVAPEGAA RPARRIAVVG PNADDQHAQL
GDWAGASGQV DWMPDGHPRE LTETVLDGLR RVVPDCWTVT HDRGADIAVM GPDPEGETFP
DGQPRPQVVH HAAPDEQMIA DAVASAREAD YVVAVVGDTI GLMGEGRSTA TLELVGAQVA
LLDALAETGT PTVVVVVSSK PLVLPASALG AAAVVQAFNP GMRGGRAVAE LVLGLVEPSG
RLPVTAARHV GQQPIYYNQL RGQHGDRYAD LTQDPQFAFG EGLSYTTVEY SDLVVAVPEV
TETGTVRAEV TLTNTGARPS RETVQVYVRD LVTSVTWATK ELKTFRQVDV PAGESVTVAL
ELPVADCTLV TSDERRVVEP GDFDLLVGPS SRDAALLAAR FTVTA