Gene Sked_03620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03620 
Symbol 
ID8632000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp400347 
End bp403847 
Gene Length3501 bp 
Protein Length1166 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313163 
Protein GI269793708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.688607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCC TGTTCAGCGC AGTCGAGCTG CACGACGCGG AGGCGGACGT CGACCAGCGC 
GCCGGGTTCC GGCTCGAGCG CCTCGAGGTG CTCAACTGGG GCACCTTCGA CCGCACCACA
TGGTCCTTCG ACCTCGAGGG GCGCAACGCC CTGCTCACCG GGGACATCGG CTCGGGCAAG
TCGACCATCG TCGACGCCGT CACCACCCTG CTGCTGCCCG CCAACCGCAT CAGCTACAAC
AAGGCGGCCG GCGCCGAGGC CAAGGAGCGC ACGCTGCGCT CGTACGTGTC GGGCTACTAC
AAGTCCGAGC GCAACGAGGC CACGGGCACC TCGCGCCCCG TGGGCCTGCG CGAGGGCTCG
ACGTACTCGG TGATCCTCGG TGAGTTCGTC AACCGCGGCT TCGAGGCCAC GGGCGTCCTC
GCCCAGGTGT TCTGGCTCAA GGACGGCGAC CAGGGGCAGC CCAGCCGCTT CTACGTCACC
GCGGCGTCGA GCATGACGAT CGCCGAGCAC TTCGCGAACT TCGACGGGGA CATCACGCGG
CTGCGCAAGC GCCTGCGCGA GGCCGGTGCG CAGGTCCGCG ACACCTTCCC CGAGTACGGC
AAGGACTTCC GCCGCATGCT CGGCATCGAG TCCGACCAGG CCATGGACCT GTTCCACCAG
ACCGTGTCGA TGAAGTCCGT CGGCGACCTC AACGAGTTCG TCCGCCAGCA CATGCTCGAG
CCCTTCGACT CCGGGCAGTG GACCGACCGT CTGGTCGCGC ACTTCGACGA CCTCACCCGC
GCCCACGACG CCGTGACCCG GGCGCGCGCG CAGATCATGC AGCTCACGCC GCTCGTCGCC
GACTGCGACC GCTTCGCGGG TCTCGTCGAC CAGGCGAGCG CCGCGACCGC GCAGCGCGAC
GCCCTGCGGG TGTTCACCGC GCAGCGCAAG GACAGCGTCC TCACCGCGCA GATCGACGCC
TACGACGCGG CGATCCGCGC CCGCGACGAG CGGCTCGTGT CCCTCGACGT CGAGATCAGG
ACGAGCGAGG CCGAGCGTCG TCGGCTCGAG CTCGAGCGGG CCGGGCACGG CGGCGACCGC
CTCGCCCAGA TCGAGGCCGA GTCCGCGCGC CTCGACGCGG TGCGCGCCGA CCGCGAGAAG
CGCGCGGCCG AGTACCGCAG CAACCTCGAG GCCGCCGGGC TCGAGGGCGT CGCCGACGCC
GCGGAGTTCG CCGCGCGCCG CGACCAGGTC CTCGCGCAGG TCGCGACGGA GAAGACCGAG
CTGCAGCAGG TCGAGACCGC GATCGGCGAG ATCGACTACG CGCTCCGTGA GCAGAAGGTC
GTCTCCCGCG AGATCACCGA GGAGATCCGC AGCCTCCAGG GACGCAGCTC GAGCCTGCCC
GCGCGCAGCC TGCAGGTCCG CGCGCAGATC GCGACCGAGC TGGGCATCCC CGAGGACGAG
CTGGCCTTCG CCGGCGAGCT CATCGCCGTG CGCGACGACC ACCGCGACTG GGAGGGCGCC
GCGGAGCGTG TGCTCCGCAG CTTCGCGCTG TCACTGCTGG TGCCCGCCGC GCACTACGAC
GCGGTGTCCG GGTGGATCAA CAGCAACCAC CTCGGCCAGC GCCTCGAGTA CTACCGGGTG
CCTGCCGAGG TCCGACCGCG CGTCGAGAGC GGCGGCGGGG CGGACTGGCC GCACCTGTCC
GAGATGCTCG AGATCCAGGA GTCGACGGTC TCGCGGTGGC TCGAGCAGGA GCTCGCGCGC
CGTGCCGACT ACGCCTGCGT GGACTCCCTC GACGAGTTCC GCCGTGCGCA CCGCGCCGTG
ACGCGCGAGG GCCAGATCAA GCACTCGGCC AGCCACCACG TGAAGAACGA CCGCAACCGC
GTCGACGACC GCTCGACCTA CGTGCTCGGC TGGAGCAACC AGACCAAGGT CGACACGCTC
CTCGCGCAGG CGACCACGGT CTCCGAGACG GTCGCCGACC TCACCGACCA GCGGGCTGCG
CTCATCGCGA CCAAGGACGC CGTGGTCGAC CGCGCGCACG CCCTCAACCG CCTCGAGATG
TTCCGTGACT TCACCGAGCT CGACTGGGAG CAGGTGGTCC ACCAGGTCGG CGAGCTCACC
GCCGAGAAGC GCCGCATCGA GGCGAACTCC GTCGAGCTGG CCGAGCTCGC GTCGACCCTC
CAGGAGCAGA CGCGCCGCGG TGCCGAGCTC GCGGAGGAGC GCGACCGTCT CATCAGCCGC
AACGGCGGGG AGCGGCACGC GGTCGAGTCC TTCCGGACGC AGCGCGAGGC CGCGCGGAAG
GTCAGCGGCG GTGCGGGTGC GGGCGCCGGT GCCGACGGTG CTGCGACCAC CGGTGCTGCG
GGCGTCGACC AGGAGGCGCT CGACGCCGTC GCCGCGCTGT GGGAGGCGCT GCCGGGCCAG
GGCGGCGGCC GGCCGGGTGC CACCGTCGCG GGTGGTCCGG GCTCGGGCGA CGCCGCCACG
ACCATGGCTG AGATCGACGC GGCCGAGGCC GCGCTGCGCA CCCAGCTCAC CGGGGTGGTC
GAGGCGCGTC AGCGCGAGCA GGGCCAGCTG GCGACGAGCG TCGCGAAGCA GATGACGGCC
TTCAGCCAGC AGTTCCCCGT CGAGACCTCT GAGATGGACA ACGACGTGCG GGCCGCGGGG
GAGTACCGCG AGCTGCTCGA GCGCCTCGAG CGCGACGACC TGCCGCGCTT CGAGGAGAAC
TTCAAGGAGT ACCTCAACAC CAACACCATC CGCGACGTCG CCCAGTTCGC GGCCGAGCTG
CAGAAGCAGT CCGACCTCAT GAGCGACCGC GTGGACGTCA TCAACGACTC GCTGCGCGCG
ATCGACTACA ACCCTGGGAC GTACATCCGC CTCGAGATGA CCAGCACGCC CAACACCGAG
GTGCGCGACT TCCGCACCCA GCTGCGGGCC TGCACGGACG GGATCCTCGG CGAGGACCTC
GACCAGTACT CCGAGCAGCG GTTCTTGCGG GTCAAGGAGA TCATCGAGCG GTTCCGGGGG
CGCGAGGGTC AGACCGAGGC CGACCAGGCG TGGACGGTCC GGGTCACGGA CGTGCGCAAC
TGGTTCGTGC TGTCCGCGTC GGAGCGGTCC AAGGCCGACG ACGTCGAGCT CGAGCACTAC
TCCGACTCCG GTGGTAAGTC CGGTGGTCAG AAGGAGAAGC TCGCGTACAC GATCCTCGCG
GCGTCGCTGG CCTACCAGTT CCGCCTCGAC TGGGGCGCGG TGCGGTCCAA GGCCTTCCGC
TTCGTGGTGA TCGACGAGGC CTTCGGGCGC GGGTCCGACG AGTCGACGCG CTTCGCGTTG
CAGCTGTTCC GCAACCTCGG GCTGCAGCTG CTCATCGTCA CGCCGCTGCA GAAGATCCAC
GTGATCGAGC CGTTCATCTC CGCCGTCGGC TACGTCGACA ACCCCACGGG CCGCGGCTCG
CGGCTGCAGA CGCTCACCAT CAACCAGTAC CGCAGCAAGC GCTCCGAGCA CCTCCTGGGA
GCCCTCGGCG CCGAGGTCTG A
 
Protein sequence
MEGLFSAVEL HDAEADVDQR AGFRLERLEV LNWGTFDRTT WSFDLEGRNA LLTGDIGSGK 
STIVDAVTTL LLPANRISYN KAAGAEAKER TLRSYVSGYY KSERNEATGT SRPVGLREGS
TYSVILGEFV NRGFEATGVL AQVFWLKDGD QGQPSRFYVT AASSMTIAEH FANFDGDITR
LRKRLREAGA QVRDTFPEYG KDFRRMLGIE SDQAMDLFHQ TVSMKSVGDL NEFVRQHMLE
PFDSGQWTDR LVAHFDDLTR AHDAVTRARA QIMQLTPLVA DCDRFAGLVD QASAATAQRD
ALRVFTAQRK DSVLTAQIDA YDAAIRARDE RLVSLDVEIR TSEAERRRLE LERAGHGGDR
LAQIEAESAR LDAVRADREK RAAEYRSNLE AAGLEGVADA AEFAARRDQV LAQVATEKTE
LQQVETAIGE IDYALREQKV VSREITEEIR SLQGRSSSLP ARSLQVRAQI ATELGIPEDE
LAFAGELIAV RDDHRDWEGA AERVLRSFAL SLLVPAAHYD AVSGWINSNH LGQRLEYYRV
PAEVRPRVES GGGADWPHLS EMLEIQESTV SRWLEQELAR RADYACVDSL DEFRRAHRAV
TREGQIKHSA SHHVKNDRNR VDDRSTYVLG WSNQTKVDTL LAQATTVSET VADLTDQRAA
LIATKDAVVD RAHALNRLEM FRDFTELDWE QVVHQVGELT AEKRRIEANS VELAELASTL
QEQTRRGAEL AEERDRLISR NGGERHAVES FRTQREAARK VSGGAGAGAG ADGAATTGAA
GVDQEALDAV AALWEALPGQ GGGRPGATVA GGPGSGDAAT TMAEIDAAEA ALRTQLTGVV
EARQREQGQL ATSVAKQMTA FSQQFPVETS EMDNDVRAAG EYRELLERLE RDDLPRFEEN
FKEYLNTNTI RDVAQFAAEL QKQSDLMSDR VDVINDSLRA IDYNPGTYIR LEMTSTPNTE
VRDFRTQLRA CTDGILGEDL DQYSEQRFLR VKEIIERFRG REGQTEADQA WTVRVTDVRN
WFVLSASERS KADDVELEHY SDSGGKSGGQ KEKLAYTILA ASLAYQFRLD WGAVRSKAFR
FVVIDEAFGR GSDESTRFAL QLFRNLGLQL LIVTPLQKIH VIEPFISAVG YVDNPTGRGS
RLQTLTINQY RSKRSEHLLG ALGAEV