Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_03620 |
Symbol | |
ID | 8632000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 400347 |
End bp | 403847 |
Gene Length | 3501 bp |
Protein Length | 1166 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003313163 |
Protein GI | 269793708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.688607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGCC TGTTCAGCGC AGTCGAGCTG CACGACGCGG AGGCGGACGT CGACCAGCGC GCCGGGTTCC GGCTCGAGCG CCTCGAGGTG CTCAACTGGG GCACCTTCGA CCGCACCACA TGGTCCTTCG ACCTCGAGGG GCGCAACGCC CTGCTCACCG GGGACATCGG CTCGGGCAAG TCGACCATCG TCGACGCCGT CACCACCCTG CTGCTGCCCG CCAACCGCAT CAGCTACAAC AAGGCGGCCG GCGCCGAGGC CAAGGAGCGC ACGCTGCGCT CGTACGTGTC GGGCTACTAC AAGTCCGAGC GCAACGAGGC CACGGGCACC TCGCGCCCCG TGGGCCTGCG CGAGGGCTCG ACGTACTCGG TGATCCTCGG TGAGTTCGTC AACCGCGGCT TCGAGGCCAC GGGCGTCCTC GCCCAGGTGT TCTGGCTCAA GGACGGCGAC CAGGGGCAGC CCAGCCGCTT CTACGTCACC GCGGCGTCGA GCATGACGAT CGCCGAGCAC TTCGCGAACT TCGACGGGGA CATCACGCGG CTGCGCAAGC GCCTGCGCGA GGCCGGTGCG CAGGTCCGCG ACACCTTCCC CGAGTACGGC AAGGACTTCC GCCGCATGCT CGGCATCGAG TCCGACCAGG CCATGGACCT GTTCCACCAG ACCGTGTCGA TGAAGTCCGT CGGCGACCTC AACGAGTTCG TCCGCCAGCA CATGCTCGAG CCCTTCGACT CCGGGCAGTG GACCGACCGT CTGGTCGCGC ACTTCGACGA CCTCACCCGC GCCCACGACG CCGTGACCCG GGCGCGCGCG CAGATCATGC AGCTCACGCC GCTCGTCGCC GACTGCGACC GCTTCGCGGG TCTCGTCGAC CAGGCGAGCG CCGCGACCGC GCAGCGCGAC GCCCTGCGGG TGTTCACCGC GCAGCGCAAG GACAGCGTCC TCACCGCGCA GATCGACGCC TACGACGCGG CGATCCGCGC CCGCGACGAG CGGCTCGTGT CCCTCGACGT CGAGATCAGG ACGAGCGAGG CCGAGCGTCG TCGGCTCGAG CTCGAGCGGG CCGGGCACGG CGGCGACCGC CTCGCCCAGA TCGAGGCCGA GTCCGCGCGC CTCGACGCGG TGCGCGCCGA CCGCGAGAAG CGCGCGGCCG AGTACCGCAG CAACCTCGAG GCCGCCGGGC TCGAGGGCGT CGCCGACGCC GCGGAGTTCG CCGCGCGCCG CGACCAGGTC CTCGCGCAGG TCGCGACGGA GAAGACCGAG CTGCAGCAGG TCGAGACCGC GATCGGCGAG ATCGACTACG CGCTCCGTGA GCAGAAGGTC GTCTCCCGCG AGATCACCGA GGAGATCCGC AGCCTCCAGG GACGCAGCTC GAGCCTGCCC GCGCGCAGCC TGCAGGTCCG CGCGCAGATC GCGACCGAGC TGGGCATCCC CGAGGACGAG CTGGCCTTCG CCGGCGAGCT CATCGCCGTG CGCGACGACC ACCGCGACTG GGAGGGCGCC GCGGAGCGTG TGCTCCGCAG CTTCGCGCTG TCACTGCTGG TGCCCGCCGC GCACTACGAC GCGGTGTCCG GGTGGATCAA CAGCAACCAC CTCGGCCAGC GCCTCGAGTA CTACCGGGTG CCTGCCGAGG TCCGACCGCG CGTCGAGAGC GGCGGCGGGG CGGACTGGCC GCACCTGTCC GAGATGCTCG AGATCCAGGA GTCGACGGTC TCGCGGTGGC TCGAGCAGGA GCTCGCGCGC CGTGCCGACT ACGCCTGCGT GGACTCCCTC GACGAGTTCC GCCGTGCGCA CCGCGCCGTG ACGCGCGAGG GCCAGATCAA GCACTCGGCC AGCCACCACG TGAAGAACGA CCGCAACCGC GTCGACGACC GCTCGACCTA CGTGCTCGGC TGGAGCAACC AGACCAAGGT CGACACGCTC CTCGCGCAGG CGACCACGGT CTCCGAGACG GTCGCCGACC TCACCGACCA GCGGGCTGCG CTCATCGCGA CCAAGGACGC CGTGGTCGAC CGCGCGCACG CCCTCAACCG CCTCGAGATG TTCCGTGACT TCACCGAGCT CGACTGGGAG CAGGTGGTCC ACCAGGTCGG CGAGCTCACC GCCGAGAAGC GCCGCATCGA GGCGAACTCC GTCGAGCTGG CCGAGCTCGC GTCGACCCTC CAGGAGCAGA CGCGCCGCGG TGCCGAGCTC GCGGAGGAGC GCGACCGTCT CATCAGCCGC AACGGCGGGG AGCGGCACGC GGTCGAGTCC TTCCGGACGC AGCGCGAGGC CGCGCGGAAG GTCAGCGGCG GTGCGGGTGC GGGCGCCGGT GCCGACGGTG CTGCGACCAC CGGTGCTGCG GGCGTCGACC AGGAGGCGCT CGACGCCGTC GCCGCGCTGT GGGAGGCGCT GCCGGGCCAG GGCGGCGGCC GGCCGGGTGC CACCGTCGCG GGTGGTCCGG GCTCGGGCGA CGCCGCCACG ACCATGGCTG AGATCGACGC GGCCGAGGCC GCGCTGCGCA CCCAGCTCAC CGGGGTGGTC GAGGCGCGTC AGCGCGAGCA GGGCCAGCTG GCGACGAGCG TCGCGAAGCA GATGACGGCC TTCAGCCAGC AGTTCCCCGT CGAGACCTCT GAGATGGACA ACGACGTGCG GGCCGCGGGG GAGTACCGCG AGCTGCTCGA GCGCCTCGAG CGCGACGACC TGCCGCGCTT CGAGGAGAAC TTCAAGGAGT ACCTCAACAC CAACACCATC CGCGACGTCG CCCAGTTCGC GGCCGAGCTG CAGAAGCAGT CCGACCTCAT GAGCGACCGC GTGGACGTCA TCAACGACTC GCTGCGCGCG ATCGACTACA ACCCTGGGAC GTACATCCGC CTCGAGATGA CCAGCACGCC CAACACCGAG GTGCGCGACT TCCGCACCCA GCTGCGGGCC TGCACGGACG GGATCCTCGG CGAGGACCTC GACCAGTACT CCGAGCAGCG GTTCTTGCGG GTCAAGGAGA TCATCGAGCG GTTCCGGGGG CGCGAGGGTC AGACCGAGGC CGACCAGGCG TGGACGGTCC GGGTCACGGA CGTGCGCAAC TGGTTCGTGC TGTCCGCGTC GGAGCGGTCC AAGGCCGACG ACGTCGAGCT CGAGCACTAC TCCGACTCCG GTGGTAAGTC CGGTGGTCAG AAGGAGAAGC TCGCGTACAC GATCCTCGCG GCGTCGCTGG CCTACCAGTT CCGCCTCGAC TGGGGCGCGG TGCGGTCCAA GGCCTTCCGC TTCGTGGTGA TCGACGAGGC CTTCGGGCGC GGGTCCGACG AGTCGACGCG CTTCGCGTTG CAGCTGTTCC GCAACCTCGG GCTGCAGCTG CTCATCGTCA CGCCGCTGCA GAAGATCCAC GTGATCGAGC CGTTCATCTC CGCCGTCGGC TACGTCGACA ACCCCACGGG CCGCGGCTCG CGGCTGCAGA CGCTCACCAT CAACCAGTAC CGCAGCAAGC GCTCCGAGCA CCTCCTGGGA GCCCTCGGCG CCGAGGTCTG A
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Protein sequence | MEGLFSAVEL HDAEADVDQR AGFRLERLEV LNWGTFDRTT WSFDLEGRNA LLTGDIGSGK STIVDAVTTL LLPANRISYN KAAGAEAKER TLRSYVSGYY KSERNEATGT SRPVGLREGS TYSVILGEFV NRGFEATGVL AQVFWLKDGD QGQPSRFYVT AASSMTIAEH FANFDGDITR LRKRLREAGA QVRDTFPEYG KDFRRMLGIE SDQAMDLFHQ TVSMKSVGDL NEFVRQHMLE PFDSGQWTDR LVAHFDDLTR AHDAVTRARA QIMQLTPLVA DCDRFAGLVD QASAATAQRD ALRVFTAQRK DSVLTAQIDA YDAAIRARDE RLVSLDVEIR TSEAERRRLE LERAGHGGDR LAQIEAESAR LDAVRADREK RAAEYRSNLE AAGLEGVADA AEFAARRDQV LAQVATEKTE LQQVETAIGE IDYALREQKV VSREITEEIR SLQGRSSSLP ARSLQVRAQI ATELGIPEDE LAFAGELIAV RDDHRDWEGA AERVLRSFAL SLLVPAAHYD AVSGWINSNH LGQRLEYYRV PAEVRPRVES GGGADWPHLS EMLEIQESTV SRWLEQELAR RADYACVDSL DEFRRAHRAV TREGQIKHSA SHHVKNDRNR VDDRSTYVLG WSNQTKVDTL LAQATTVSET VADLTDQRAA LIATKDAVVD RAHALNRLEM FRDFTELDWE QVVHQVGELT AEKRRIEANS VELAELASTL QEQTRRGAEL AEERDRLISR NGGERHAVES FRTQREAARK VSGGAGAGAG ADGAATTGAA GVDQEALDAV AALWEALPGQ GGGRPGATVA GGPGSGDAAT TMAEIDAAEA ALRTQLTGVV EARQREQGQL ATSVAKQMTA FSQQFPVETS EMDNDVRAAG EYRELLERLE RDDLPRFEEN FKEYLNTNTI RDVAQFAAEL QKQSDLMSDR VDVINDSLRA IDYNPGTYIR LEMTSTPNTE VRDFRTQLRA CTDGILGEDL DQYSEQRFLR VKEIIERFRG REGQTEADQA WTVRVTDVRN WFVLSASERS KADDVELEHY SDSGGKSGGQ KEKLAYTILA ASLAYQFRLD WGAVRSKAFR FVVIDEAFGR GSDESTRFAL QLFRNLGLQL LIVTPLQKIH VIEPFISAVG YVDNPTGRGS RLQTLTINQY RSKRSEHLLG ALGAEV
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