Gene Sked_03550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03550 
Symbol 
ID8631993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp392631 
End bp393701 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content76% 
IMG OID 
Productprotein of unknown function (DUF916) 
Protein accessionYP_003313156 
Protein GI269793701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC GCCCTGCTCG CGCCGCGCTG CTGCTCGCCG CCGCCTCGCT GCTCTCCGCC 
CTCGGCACGC TCCCCGCCAC GGCCGCCGAC GACGCGCCGC TCCCCGGGAC CACGTGGACC
GTCGAGCCCG CGACCGCCGA CGGCCCCGAC GGTCGCGTCT CGCACCGCAT CGACGCGGAG
CCCGGGCAGA CCGTGGCCGA CCACGTGGCC GTCACGAACT ACTCGGAGCA CCCCGCGACC
TTCGAGCTCT ACGCGAGCGA CGGCCTCGTC ACCGCTGACG GCCAGTTCGA CCTGCTGCCC
TCCGGCACCA CCCCCGTCGA CTCGGGGGCA TGGGTGTCCG TCGGCGAGGG CGGCGTGCCC
GCGACCGAGG GCAGCACGCC GATGCGCGTC GAGGTCGCCC CCGAGGCGAC CGTCACCGTG
CCCTTCACCC TGACCGTCCC GGCGGATGCG ACCCCGGGCG ACCACCCCGC GGGCATCGTC
GCCGCGCTCG TGCCCGTCGC GGGCGAGCAG CAGGTGTCCT TCGACGCGCG CGTGGGCGTG
CGCCTGCACC TGCGGGTAGC AGGCGACGTG CTGCCGACCC TCGCGGTGAC CGACGTCCAG
GCCGGCTACT CGCCGTCGTG GAACCCCTTC GCGCCCGGCT CCGTCGAGGT CGAGTACACG
GTGACCAACG AGGGCAACGT CCGGCTGGGT GCCGGGATCA CGGCCGACGC CGCCGGACCG
TTCGGCTGGG CCTCGACGAG CGGCGAGGGT GTCGCTCAGC GCGAGCTGCT GCCGCGCCAG
GCCGTCACGT CGACCGTGGT GCTCGCCGGG ACCTGGCCGC TGGGACCGGT GTCGGGCGAG
GTGACCGTGG TGCCGGTGGT CGTCGGCGAC GACGTCGTCG AGGTCGAGGT CCCGACCGTC
GCGGCCGGCT GGTCGGCGTG GGCCCTGCCG TGGGCGCAGC TCGCCCTGCT GGCCCTCGCG
GTCGCCGCGG TGCTGCTGGT CCGCCGCACC CGCCGTCGCC GCGAGCTGGC CACCCAGCGC
CGCATCGACG CCGCCGTCGC AGCCCTCGAC CGCGAGACCG TCGACGCCTG A
 
Protein sequence
MTSRPARAAL LLAAASLLSA LGTLPATAAD DAPLPGTTWT VEPATADGPD GRVSHRIDAE 
PGQTVADHVA VTNYSEHPAT FELYASDGLV TADGQFDLLP SGTTPVDSGA WVSVGEGGVP
ATEGSTPMRV EVAPEATVTV PFTLTVPADA TPGDHPAGIV AALVPVAGEQ QVSFDARVGV
RLHLRVAGDV LPTLAVTDVQ AGYSPSWNPF APGSVEVEYT VTNEGNVRLG AGITADAAGP
FGWASTSGEG VAQRELLPRQ AVTSTVVLAG TWPLGPVSGE VTVVPVVVGD DVVEVEVPTV
AAGWSAWALP WAQLALLALA VAAVLLVRRT RRRRELATQR RIDAAVAALD RETVDA