Gene Sked_02870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02870 
Symbol 
ID8631925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp311320 
End bp313392 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content69% 
IMG OID 
Productfamily 31 glycosyl hydrolase, alpha-glucosidase 
Protein accessionYP_003313090 
Protein GI269793635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACG CGTTCGTCAT CGACACCGAC CGTCTGATCT GGAGAGGGAG CGGCGAGACC 
GTCGTGATCG AGCCCTGGGG GGCCGACTCG GTGCGCGTGC GCGCCGCGCT CGGCGGCCCG
GTGGTCGACA CCGACTGGGC GTTGTTGCCG CAGGGGGTTG CGGCTGGGCT GGGTGAGTCG
GCGGGGCGTG GGTCGGGGGT GAGTGTCACC GTCGACGGGG ACGTCGCGAC GCTCGTCCAC
GGCGAGATCC GTGTGGTGGC GACGTCGCGG GAGTACTACG ACTGGCAGGC GCAGTACAGC
CGGTCGCGGT GCCGGCTCGA GTTCTTCGAT TCACGTGGAA CCTTGCTCTT CGCCGAGGAG
GAGGACGGCG GGGCCCTCAA GCTGCGGGCC CGCGACTACG ACGCGCTGCC CGGCGGGACG
CACCGCGCGC GAGTGTCGTT CGTCGGTGCG CGCGACGAGA AGCTCTACGG CATGGGGCAG
TACCAGCAGG ACCTCCTCGA CCTCAAGGGG TCGACGGTCG AGCTCGCGCA CCGCAACTCG
CAGGTGTCCG TGCCCTTTGT CATGTCGAGC GCGGGGTACG GGTTCCTCTG GCACAACCCG
GCGATCGGGC GCGCGACCTT CGCGACCAAC CGCACCGAGT GGGTGGCCGA GTCGACGACG
CAGATCGACT ACTGGGTGAC CGCCGGCGCC ACGCCTGCTG ACATCGCGCG GAACTACGCG
AATGCCACCG GGCACGCGCC GATGATGCCC GAGCACGGAC TTGGGTTCTG GCAGTGCAAG
CTCCGGTACT CCTCGCAGGA GGAGCTGCTC ACGGTGGCGC GCGAGCACCA CCGGCGAGGG
CTGCCGATGG ACGTGATCGT CGCGGACTTC TTCCACTGGC CCAAGATGGG CGACTTCAGG
TTCGAGGACG AGTTCTGGCC GGACCCGGAG GCTATGGTCG CGGAGCTGGC GGGCATGGGC
ATCGAGCTCA TGGTGTCGGT GTGGCCGCAG GTGTCCCTCG AGTCGGAGAA CTTCGCCGAG
CTCGACCGCC TGGGGTACCT GGTGCGGTCG AACCGGGGTG TGGACATCCA GATGAGCTTC
GAAGGACCGA GCCGGTTCCT CGACGTGACC AACCCTGCCG CGCGCGAGTG GCTGTGGGCG
AAGCTGCGCG TCAACTATCC GGGCGTCAAG CTGTTCTGGC TCGACGAGGC CGAGCCGGAG
TACGCCTTCT TCGAGTTCGG CGCCTACTCG TACTACGCCG GCCAGGTGCT CGAGGTGGGG
AACGTCTATC CACAGCTGTT CTCACGGGCT GTGTACGACG GGCAGGTGGC TGACGGGCAG
AGCGATCCGG TGAACCTCGT GCGGTGCGCG TGGGCCGGGT CGCAGCGGTA CGGGGCGCTC
GTGTGGTCGG GAGACATCCA CTCGTCCTTC CCGTCGATGC GGCGGCAGGT GACGGCCGGG
ATCCACATGG GGGTCGCGGG GATCCCGTGG TTCACGACGG ACATCGGCGG GTTCGGGGGC
GGGCGGGTCG ACGACCCCGC ATTCCACGAG CTGCTGGTGC GGTGGTTCCA GATGGGGACC
TTCATGCCGG TGATGCGGCT GCACGGGGAC CGCGGGCCGT CGCACGAGGT GTTGGCTGCT
GACGGGAGCC GGCGCTGTAA CTCTGGCGCG GACAACGAGC TGTGGTCGTA CGGGCACGAG
GTCTACGAGA TCCTGTCGCG GTACGTGCAT CTGCGCGAAG AGATGCGGGA GTACACGCGG
GGATTGATGG AGGCTGCGCA TGTTGACGGG CAGCCGGTGA TGCGGGGGTT GTTCCACGAC
TTCCCGGAGG ATGCTGCGGC GTGGGATGTG GCCGACCAGT TCTTGTACGG GCCGTCGTTG
CTGGTGGCTC CGGTGCTGGA GGCTGGGGCG AGGACGCGGC GGGTGTACCT GCCGGCGGGG
GCGTCGTGGA CGTCGCTGGC GACGGGGGAG CGGTATGACG GTGGGGTGTG GGTCGAGGTC
GACGCGCCGC TCGACGTCAT CCCGGTGTTC GCGCGGGACT CGGCGCTCGC GGAGCTGGTC
CGGACAATCG GTACCGAAGC TCCAATCCAT TGA
 
Protein sequence
MPDAFVIDTD RLIWRGSGET VVIEPWGADS VRVRAALGGP VVDTDWALLP QGVAAGLGES 
AGRGSGVSVT VDGDVATLVH GEIRVVATSR EYYDWQAQYS RSRCRLEFFD SRGTLLFAEE
EDGGALKLRA RDYDALPGGT HRARVSFVGA RDEKLYGMGQ YQQDLLDLKG STVELAHRNS
QVSVPFVMSS AGYGFLWHNP AIGRATFATN RTEWVAESTT QIDYWVTAGA TPADIARNYA
NATGHAPMMP EHGLGFWQCK LRYSSQEELL TVAREHHRRG LPMDVIVADF FHWPKMGDFR
FEDEFWPDPE AMVAELAGMG IELMVSVWPQ VSLESENFAE LDRLGYLVRS NRGVDIQMSF
EGPSRFLDVT NPAAREWLWA KLRVNYPGVK LFWLDEAEPE YAFFEFGAYS YYAGQVLEVG
NVYPQLFSRA VYDGQVADGQ SDPVNLVRCA WAGSQRYGAL VWSGDIHSSF PSMRRQVTAG
IHMGVAGIPW FTTDIGGFGG GRVDDPAFHE LLVRWFQMGT FMPVMRLHGD RGPSHEVLAA
DGSRRCNSGA DNELWSYGHE VYEILSRYVH LREEMREYTR GLMEAAHVDG QPVMRGLFHD
FPEDAAAWDV ADQFLYGPSL LVAPVLEAGA RTRRVYLPAG ASWTSLATGE RYDGGVWVEV
DAPLDVIPVF ARDSALAELV RTIGTEAPIH