Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_02420 |
Symbol | |
ID | 8631880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 264512 |
End bp | 265720 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | D-mannonate dehydratase |
Protein accession | YP_003313045 |
Protein GI | 269793590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.296933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TCGAACGCGC AGAGGTCTTC GTCGCAGGAC CCGGGCGCAA CTTCGTCACC CTGCGCATCA CCACCTCCGA CGGGGTCACC GGCATCGGGG ACGCCACCCT CAACGGCCGC GAGCTCTCCG TCGCCAGCTA CCTCCAGGAC CACCTCGTCC CGCTGCTGGT CGGGCGCGAC CCCGCGCGCA TCGACGACAT GTGGCAGTAC CTCTACCGCG GTGCGTACTG GCGCCGCGGC CCGGTCACCA TGACCGCGAT CTCCGCGGTC GACACCGCCC TCTGGGACAT CAAGGGCAAG GTCGCCGGCC TGCCCGTGTA CCAGCTGCTC GGCGGGCGCT CCCGCGACGG CGTCATGGTC TACAGCCACG CGAGCGGCCG CGACACCGCC GAGCTGCTCG ACGACGTCAC CCGATTCCAG GAGCTCGGGT ACAAGGCGAT CCGCGCCCAG GCCGCCGTGC CCGGGGTCGG CGGCTCCTAC GGCGTCCGCA AGGGCGCCAT CTACGAGCCC GCCGCGACGT CGCTCCCCGA CGAGCAGCCG TGGTCGACCG AGGCCTACCT GCGCTTCGCC CCCACGTACC TCGAGGCCGT CCGCGACCAC GCGGGCCCCG AGCTCCACCT GCTGCACGAC GTCCACCACC GCCTCACCCC CATCGAGGCC GCGGCCTTCG GCAAGAGCGT CGAGGCCGTC CGGCTGTTCT GGATGGAGGA CCCGACCCCG GCCGAGAACC AGGACGCGTT CCGGCTCATC CGCCAGCACA CCACGACCCC CATCGCGGTC GGCGAGGTGC TCAACAGCAT CTGGGACGTC AAGGACCTCA TCACCAACCA GCTCGTCGAC TACGTCCGGA CCACCGTGGT GCACGCCGGC GGCATCAGCC ACCTGCGGCG CATCTTCGAC CTCGCCGCGC TCTACCAGGT GCGCACCGGG TCGCACGGCG CGACCGACCT GTCGCCCGTC ACGCTCGCCG CGGCGGTCCA CCTCGACCTC ACGGTGCCCA ACTTCGGCAT CCAGGAGTAC ATGGAGCACG CCCCCGAGAC CATGGAGGTG TTCCGCAGCG GCGTCACCCT CGCCGACGGC ATGCTCAACC CGGGCGAGGC ACCCGGCCTC GGCGTCGAGT ACGACGAGAA GGCCGCCGCC CGCTACCCCT ACGACCCCCG CTACCTCCCC GTGGCCCGCC GCCTCGACGG CTCCGTCCAC GACTGGTGA
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Protein sequence | MSTIERAEVF VAGPGRNFVT LRITTSDGVT GIGDATLNGR ELSVASYLQD HLVPLLVGRD PARIDDMWQY LYRGAYWRRG PVTMTAISAV DTALWDIKGK VAGLPVYQLL GGRSRDGVMV YSHASGRDTA ELLDDVTRFQ ELGYKAIRAQ AAVPGVGGSY GVRKGAIYEP AATSLPDEQP WSTEAYLRFA PTYLEAVRDH AGPELHLLHD VHHRLTPIEA AAFGKSVEAV RLFWMEDPTP AENQDAFRLI RQHTTTPIAV GEVLNSIWDV KDLITNQLVD YVRTTVVHAG GISHLRRIFD LAALYQVRTG SHGATDLSPV TLAAAVHLDL TVPNFGIQEY MEHAPETMEV FRSGVTLADG MLNPGEAPGL GVEYDEKAAA RYPYDPRYLP VARRLDGSVH DW
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