Gene Sked_02420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02420 
Symbol 
ID8631880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp264512 
End bp265720 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID 
ProductD-mannonate dehydratase 
Protein accessionYP_003313045 
Protein GI269793590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCGAACGCGC AGAGGTCTTC GTCGCAGGAC CCGGGCGCAA CTTCGTCACC 
CTGCGCATCA CCACCTCCGA CGGGGTCACC GGCATCGGGG ACGCCACCCT CAACGGCCGC
GAGCTCTCCG TCGCCAGCTA CCTCCAGGAC CACCTCGTCC CGCTGCTGGT CGGGCGCGAC
CCCGCGCGCA TCGACGACAT GTGGCAGTAC CTCTACCGCG GTGCGTACTG GCGCCGCGGC
CCGGTCACCA TGACCGCGAT CTCCGCGGTC GACACCGCCC TCTGGGACAT CAAGGGCAAG
GTCGCCGGCC TGCCCGTGTA CCAGCTGCTC GGCGGGCGCT CCCGCGACGG CGTCATGGTC
TACAGCCACG CGAGCGGCCG CGACACCGCC GAGCTGCTCG ACGACGTCAC CCGATTCCAG
GAGCTCGGGT ACAAGGCGAT CCGCGCCCAG GCCGCCGTGC CCGGGGTCGG CGGCTCCTAC
GGCGTCCGCA AGGGCGCCAT CTACGAGCCC GCCGCGACGT CGCTCCCCGA CGAGCAGCCG
TGGTCGACCG AGGCCTACCT GCGCTTCGCC CCCACGTACC TCGAGGCCGT CCGCGACCAC
GCGGGCCCCG AGCTCCACCT GCTGCACGAC GTCCACCACC GCCTCACCCC CATCGAGGCC
GCGGCCTTCG GCAAGAGCGT CGAGGCCGTC CGGCTGTTCT GGATGGAGGA CCCGACCCCG
GCCGAGAACC AGGACGCGTT CCGGCTCATC CGCCAGCACA CCACGACCCC CATCGCGGTC
GGCGAGGTGC TCAACAGCAT CTGGGACGTC AAGGACCTCA TCACCAACCA GCTCGTCGAC
TACGTCCGGA CCACCGTGGT GCACGCCGGC GGCATCAGCC ACCTGCGGCG CATCTTCGAC
CTCGCCGCGC TCTACCAGGT GCGCACCGGG TCGCACGGCG CGACCGACCT GTCGCCCGTC
ACGCTCGCCG CGGCGGTCCA CCTCGACCTC ACGGTGCCCA ACTTCGGCAT CCAGGAGTAC
ATGGAGCACG CCCCCGAGAC CATGGAGGTG TTCCGCAGCG GCGTCACCCT CGCCGACGGC
ATGCTCAACC CGGGCGAGGC ACCCGGCCTC GGCGTCGAGT ACGACGAGAA GGCCGCCGCC
CGCTACCCCT ACGACCCCCG CTACCTCCCC GTGGCCCGCC GCCTCGACGG CTCCGTCCAC
GACTGGTGA
 
Protein sequence
MSTIERAEVF VAGPGRNFVT LRITTSDGVT GIGDATLNGR ELSVASYLQD HLVPLLVGRD 
PARIDDMWQY LYRGAYWRRG PVTMTAISAV DTALWDIKGK VAGLPVYQLL GGRSRDGVMV
YSHASGRDTA ELLDDVTRFQ ELGYKAIRAQ AAVPGVGGSY GVRKGAIYEP AATSLPDEQP
WSTEAYLRFA PTYLEAVRDH AGPELHLLHD VHHRLTPIEA AAFGKSVEAV RLFWMEDPTP
AENQDAFRLI RQHTTTPIAV GEVLNSIWDV KDLITNQLVD YVRTTVVHAG GISHLRRIFD
LAALYQVRTG SHGATDLSPV TLAAAVHLDL TVPNFGIQEY MEHAPETMEV FRSGVTLADG
MLNPGEAPGL GVEYDEKAAA RYPYDPRYLP VARRLDGSVH DW