Gene Sked_01730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01730 
Symbol 
ID8631811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp180102 
End bp181037 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content74% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_003312979 
Protein GI269793524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.330616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG ACCTCGGTGG TGCGCCCTCC GGCGGCGGGC CCACGCTCTC GCCCGGGTCC 
CCCGCCACCG AGGCGCTCAC CGCCCGTGCG GCCGCCGAGG TCGCCGGACG TGCGGCCGAC
GGCGCGTGCC TCGTGGCCCT CGACGTCGAC GGCACCCTCA TGTCCTTCGA CGAGTTCATC
TCGGACGAGG TCCGCGAGTC GATCACCGCG CTGCGCGAGG CCGGCCACGA GGTGGTCATC
GCGACCGGGC GCCCGCTGGT CGGCGCGCTC CCCGTCGCGC GGGAGCTCGG CATCGACTCC
GGCTGGGTGG TGTCGTCGAA CGGGTCCGTG ACCGCGCGCC TCGACCCGAC CCTCCCGGAC
GGCTACGTGG TCGAGGACGT CGTGCGGTTC GACCCGCGCG CCGCCCTCGC CGTCATGGCC
GAGCACATGC CCTCGGCGCA CATCGCGATG GAGGAGGTCG GGGTCGGCTT CTGGGTGACC
GACGGCTTCC CGGCACACGG GACCCACGGC CCGAGCCAGG TGGTGTCCCT CGAGGACCTC
GGCGGGCGCG ACGCGATCCG CGTGGTGGTC TCCGAGGCGT CGACGCCGAC GCGCGAGCTC
GAGCGACGGG TGGAAGAGCT CGGCCTGGTG GCCACGTCGT TCTTCATCTC CGCGACGCGT
TGGATGGACG TGGCCCCGCG CGGGGTCACC AAGGCCTCCG CCCTCGAGCG GCTCCGTGCG
CTCTGCTCGG TCCCGGCGGA GCGGACCGTG GCGATCGGCG ACGGCGAGAA CGACCTCGAG
ATGCTCGGGT GGGCCGGTCG CGGCGTCGCG ATGGGGCACG CCGAGGCCAA GGTCATCGCC
GCGGCCGACG AGGTCACGCT GTCGATCGTC GACGACGGTG CCGTCCCGGT GCTGCGCAGC
ATCCTCGACC CAGGACGGGG ACAGTCCGTG CCGTGA
 
Protein sequence
MTLDLGGAPS GGGPTLSPGS PATEALTARA AAEVAGRAAD GACLVALDVD GTLMSFDEFI 
SDEVRESITA LREAGHEVVI ATGRPLVGAL PVARELGIDS GWVVSSNGSV TARLDPTLPD
GYVVEDVVRF DPRAALAVMA EHMPSAHIAM EEVGVGFWVT DGFPAHGTHG PSQVVSLEDL
GGRDAIRVVV SEASTPTREL ERRVEELGLV ATSFFISATR WMDVAPRGVT KASALERLRA
LCSVPAERTV AIGDGENDLE MLGWAGRGVA MGHAEAKVIA AADEVTLSIV DDGAVPVLRS
ILDPGRGQSV P