Gene Sked_01360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01360 
Symbol 
ID8631774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp139989 
End bp140894 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID 
Productpredicted permease, DMT superfamily 
Protein accessionYP_003312942 
Protein GI269793487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.554543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG CTCGTCCTCT TCGTGCTGCC CACCCGCACC TCGCGCCTCT CCTCGGCGGC 
CTGTTCGTGC TCGTCGGGTC GCTCAGCATC CAGACCTCGG CGGCGATCGC CTCCGACCTC
TTCGAGACCG TCGGCACGCT CGGCGTCAGC GGTCTCCGGA TGGCCGTCGC CGCACTGGTG
CTCGTCGTCC TCGTCCGTCC GTCGGTCCGC GGCCGGTCGC GCCGCGCCTG GACCGGCATC
GTCCTCTACG GCGTGGCCAT GGCCGCGATG AACGTCCTCT TCTACAACGC CGTCGCCCAC
CTGCCGCTCG GCATCGCGGT GACCCTCGAG TTCCTCGGGC CGCTCGCGGT CGCGGCGGTC
GCCACGACGC GGCGCCGCGA GCTGCTGCTG CCGGCGGTGA CCCTCGTCGG CGTCGTCCTG
GTGAGCAGCC CGGGTGGCGG TCTCACACTG ATCGGTCTGG TCTTCGGCCT CGGCGCGGCC
GTGGCCTTCG GCGGGTACAC GGTCCTCGCC GGTCGGGTGG GCGGCGACAC CGACGGCCTC
GACGGGCTCG CCCTGTCGGT GGTGGTCGGC GCCGTGCTGC TCGCACCGTT CTCCGTGCAG
GCCGCACCGC GGGTCGACGG CGGCGGCTGG GGCGTGCTCG CCGTCTCGGC GGTCCTCGGG
GTGGTCGTCG CCTTCAGCCT CGACTTCCTC GCCGTCCGGC TCACCTCGGT CCGGGTGGTC
GGCACGCTCT TCGCCGTCGA CCCGGTCATG GGCGCGCTGG TCGGCGCTGT CGCGCTCGGA
GAGACCCTCA CCGCGGGAGT GGTCACCGGG ATCGTGCTGG TCGTCGGGTC GGGTGCGACG
GTCATCTGGC TCGCCGGCCG GCGGGCCGCG TCCGGGCAGG TGCCCGTCCC CGTCCCGCAG
GACTGA
 
Protein sequence
MTHARPLRAA HPHLAPLLGG LFVLVGSLSI QTSAAIASDL FETVGTLGVS GLRMAVAALV 
LVVLVRPSVR GRSRRAWTGI VLYGVAMAAM NVLFYNAVAH LPLGIAVTLE FLGPLAVAAV
ATTRRRELLL PAVTLVGVVL VSSPGGGLTL IGLVFGLGAA VAFGGYTVLA GRVGGDTDGL
DGLALSVVVG AVLLAPFSVQ AAPRVDGGGW GVLAVSAVLG VVVAFSLDFL AVRLTSVRVV
GTLFAVDPVM GALVGAVALG ETLTAGVVTG IVLVVGSGAT VIWLAGRRAA SGQVPVPVPQ
D