Gene Sked_00840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00840 
Symbol 
ID8631722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp85629 
End bp86762 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID 
Producturoporphyrinogen-III synthase 
Protein accessionYP_003312891 
Protein GI269793436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0880377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.206146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG CCGACGACAC GTCCGGTGTC ACCGAGTTCA GCAACGACCA GCTCTCGGGG 
TTCCGGATCG GCGTGACGTC GGACCGGCGG TCGGACGACC TCATCGCGGC GCTCGAGCGG
CGCGGCGCGC AGGTGATGCA CGCCCCCGCG CTGCGCATCG CGCCCGTGGA GGAGGACGTC
GACCTGCTCG CGGACACCCG GGCGATCCTG GAGACGCCGC CCGACGTCAT GGTGGTCACC
ACGGCCTACG GCATGCGTCG GTGGAGCGAG GCTGCTGACG CCGCGGGCCT CGGCGACCCG
CTCACCGAGG TGCTGCAGGC CTCCCGGATC TTCGTCCGCG GTCCCAAGGC CCGCGGCGCG
GTCCGCGCGG CGGGCCTGGA CGACGTCGGC ATCGCGCACG ACGAGCGCAC CTCGTCGGTG
ATCGACATGC TGCTCGACGA GGGCGTCGAC GGGCTGACGG TGGCCGTCCA GCTCCACGGG
TACACGGACG GCCAGCAGCT CGAGCGGCTG CGTGCCGGCG GGGCGCGGGT GCTCACCGTC
GAGCCCTACC GCTGGGTGAA GCCCGACGGC GCGGAGCGGC TGCCGAGGCT CATCGACGCG
GTGTGCTCGC GCAACCTCGA CGTCGTCACC TTCACGAGCG CCCCGGCGGT CGACGCGTTC
CTCACCTCGG CGATCGAGCA GGGTGTCCTC GACCAGCTGC TCGACGCGTT GCGCACCGAC
GTGGTGGCGG CCGCCGTCGG TCCGGTGACC GCAGGGCCTC TCGAGGTCGC CGGCGTGACG
CCGATCATCC CCGAGCGGTT CCGCATGGGC GCGCTCATCC GGCTGGTGTG CGAGCACCTC
GCGCTGCACC AGGTGGCCGA GTTCCCCACC GCGCTGGGGC AGGTGCAGAT CCGCGGGCGC
TCGGTGGTCT TCGACGGCCG CGCGGGCCAG CTGGCCCCCG CCCCGCTCGC GCTGTTCCGT
GCCCTCGCCG CGAGCAAGGG GGCCGTGCTC ACCCGCAAGG ACCTCATGGC GCACCTGCCC
GAGGCCGAGA ACGAGCACGC CCTCGACATG GCGATGAGCC GGCTCCGGGC GTCGCTGCCC
GAGCCACGCC TCGTGGCGAC CGTGGTCAAG CGGGGGTACC GGCTCAACGT GTGA
 
Protein sequence
MNAADDTSGV TEFSNDQLSG FRIGVTSDRR SDDLIAALER RGAQVMHAPA LRIAPVEEDV 
DLLADTRAIL ETPPDVMVVT TAYGMRRWSE AADAAGLGDP LTEVLQASRI FVRGPKARGA
VRAAGLDDVG IAHDERTSSV IDMLLDEGVD GLTVAVQLHG YTDGQQLERL RAGGARVLTV
EPYRWVKPDG AERLPRLIDA VCSRNLDVVT FTSAPAVDAF LTSAIEQGVL DQLLDALRTD
VVAAAVGPVT AGPLEVAGVT PIIPERFRMG ALIRLVCEHL ALHQVAEFPT ALGQVQIRGR
SVVFDGRAGQ LAPAPLALFR ALAASKGAVL TRKDLMAHLP EAENEHALDM AMSRLRASLP
EPRLVATVVK RGYRLNV