Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00840 |
Symbol | |
ID | 8631722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 85629 |
End bp | 86762 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_003312891 |
Protein GI | 269793436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0880377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.206146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG CCGACGACAC GTCCGGTGTC ACCGAGTTCA GCAACGACCA GCTCTCGGGG TTCCGGATCG GCGTGACGTC GGACCGGCGG TCGGACGACC TCATCGCGGC GCTCGAGCGG CGCGGCGCGC AGGTGATGCA CGCCCCCGCG CTGCGCATCG CGCCCGTGGA GGAGGACGTC GACCTGCTCG CGGACACCCG GGCGATCCTG GAGACGCCGC CCGACGTCAT GGTGGTCACC ACGGCCTACG GCATGCGTCG GTGGAGCGAG GCTGCTGACG CCGCGGGCCT CGGCGACCCG CTCACCGAGG TGCTGCAGGC CTCCCGGATC TTCGTCCGCG GTCCCAAGGC CCGCGGCGCG GTCCGCGCGG CGGGCCTGGA CGACGTCGGC ATCGCGCACG ACGAGCGCAC CTCGTCGGTG ATCGACATGC TGCTCGACGA GGGCGTCGAC GGGCTGACGG TGGCCGTCCA GCTCCACGGG TACACGGACG GCCAGCAGCT CGAGCGGCTG CGTGCCGGCG GGGCGCGGGT GCTCACCGTC GAGCCCTACC GCTGGGTGAA GCCCGACGGC GCGGAGCGGC TGCCGAGGCT CATCGACGCG GTGTGCTCGC GCAACCTCGA CGTCGTCACC TTCACGAGCG CCCCGGCGGT CGACGCGTTC CTCACCTCGG CGATCGAGCA GGGTGTCCTC GACCAGCTGC TCGACGCGTT GCGCACCGAC GTGGTGGCGG CCGCCGTCGG TCCGGTGACC GCAGGGCCTC TCGAGGTCGC CGGCGTGACG CCGATCATCC CCGAGCGGTT CCGCATGGGC GCGCTCATCC GGCTGGTGTG CGAGCACCTC GCGCTGCACC AGGTGGCCGA GTTCCCCACC GCGCTGGGGC AGGTGCAGAT CCGCGGGCGC TCGGTGGTCT TCGACGGCCG CGCGGGCCAG CTGGCCCCCG CCCCGCTCGC GCTGTTCCGT GCCCTCGCCG CGAGCAAGGG GGCCGTGCTC ACCCGCAAGG ACCTCATGGC GCACCTGCCC GAGGCCGAGA ACGAGCACGC CCTCGACATG GCGATGAGCC GGCTCCGGGC GTCGCTGCCC GAGCCACGCC TCGTGGCGAC CGTGGTCAAG CGGGGGTACC GGCTCAACGT GTGA
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Protein sequence | MNAADDTSGV TEFSNDQLSG FRIGVTSDRR SDDLIAALER RGAQVMHAPA LRIAPVEEDV DLLADTRAIL ETPPDVMVVT TAYGMRRWSE AADAAGLGDP LTEVLQASRI FVRGPKARGA VRAAGLDDVG IAHDERTSSV IDMLLDEGVD GLTVAVQLHG YTDGQQLERL RAGGARVLTV EPYRWVKPDG AERLPRLIDA VCSRNLDVVT FTSAPAVDAF LTSAIEQGVL DQLLDALRTD VVAAAVGPVT AGPLEVAGVT PIIPERFRMG ALIRLVCEHL ALHQVAEFPT ALGQVQIRGR SVVFDGRAGQ LAPAPLALFR ALAASKGAVL TRKDLMAHLP EAENEHALDM AMSRLRASLP EPRLVATVVK RGYRLNV
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