Gene Sked_00780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00780 
Symbol 
ID8631716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp79992 
End bp80627 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003312885 
Protein GI269793430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.520548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.241125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC CTGTCTACGG AGTCTTCCTG CTGCCCGACG CCGCCACCTC GGCCGCGATC 
TCCAGCATCA CCTTCAGCGT CGAGCGGCAG TTCGGGCTCG TCTCCGCCGG GCGCTTCCCC
CCGCACGCCA CGCTGGCCGG GTCGGTCCCG ATCACCGCCC CACCCGAGCG CGTCGCGGAC
TCGCTCGACC CGGTCCTCGA CCAGAGAGCC GCCTTCGACG TCTACAACCG AGGGATCGCC
AGGCACGGAA GAGCCGTCGC CTACGACATC GACACCCTCC CCGACGGCAG CACCAACCTC
GCGCTGCACC GGCTCGCGGT CGACGTCAAC CGTGCGCTCG CCCCGCTGGC GCACCAGATC
GACGCGACGC TCGTCTCGCC CTTCGCGGCG GACCGCTTCC GGGCGCACCT CTCGCTCGCC
TCCCACGAGC TGAGCACCGA CCCCGCGATC GCGGCAGACG TGGAGGCGTT CATCCGTGAG
GTTCCCGCCC CGGCCCCCGC CGAGCACTTC ACGGCGCGGA GGGTCGCGCT CTACTCGTTC
ACCAGCGACT GCTGGGGCGG CGCGTGGTGG CGCTCCCTCG CGTGGGAGCG GATCCGGACC
TGGTCGCTGC GGGAACAGCC GGCGCAGGGG GCGTGA
 
Protein sequence
MSEPVYGVFL LPDAATSAAI SSITFSVERQ FGLVSAGRFP PHATLAGSVP ITAPPERVAD 
SLDPVLDQRA AFDVYNRGIA RHGRAVAYDI DTLPDGSTNL ALHRLAVDVN RALAPLAHQI
DATLVSPFAA DRFRAHLSLA SHELSTDPAI AADVEAFIRE VPAPAPAEHF TARRVALYSF
TSDCWGGAWW RSLAWERIRT WSLREQPAQG A