Gene Sked_00650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00650 
Symbol 
ID8631703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp65670 
End bp67091 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content73% 
IMG OID 
ProductN-acetyl-beta-hexosaminidase 
Protein accessionYP_003312872 
Protein GI269793417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.735936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.194133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC CTCTCATCCC TGCTCCGCAG ACGATCGCGA CCACCGACGC GACGACGACG 
CCGCTCACCG CAGCCCACGT CGACTCCCTC GCCGCAGCCC TCGAGCCGTG GGCGCCCCGC
GCGAGCGCAG CAGCCAGGCG CCTCCTGACC CGGGGCGTCA CCGCCGACGC CCCGACCCCG
ACGGTCGTGG TCGACGCACG GCTCGACCCC TCGCTCGCGG CCGAGGGCTA CACCCTGGAC
CTCGCCCCCG AGGCCTGGAC CCTCACGGCC GCCGACGAGG CCGGCGCGTT CTGGGCCGTC
CAGTCGCTCG CGCAGATGGT ACGGGACGGC GGTGTCCCGG CCGTGACGCT GTCCGACGCC
CCCACCTACC CCGTGCGCGG CATGATGCTC GACATCGCCC GGTTCTACTT CGGCCCCGCG
GACATCCGCC GCGTGATCGA CCTCGCGGCG TCCTACCGCC TCAACCAGCT GCACCTGCAC
CTCAGCGACG ACCAGGGCTG GCGCCTGGAG ATCCCGAGCC GACCGCTGCT CACCAAGCTC
TCCTCCGCGC AGGACGTCGC CGGCGGCGAG GGCGGGTCGC TCACCCTCGC GGACTACCAC
GAGCTCCAGC AGTACGCCCT CGACCGGCAC GTGGTGATCG TCCCCGAGGT CGACCTCCCG
GGGCACACGC ACGCCGCGCA GGTGGCCTAC CCCGAGATCA GCCCGGACGG CCAGGAGCGC
GAGCCCTACA CCGGGACCGA GGTCGGCTTC AGCTCGCTGC ACCTCACCTC CGACGAGGCG
TGGGCCTTCG TGGACGACGT CGTCGCGACC CTCGCCGAGC ACACCCTCGG GGAGTACATC
CACCTCGGCG GCGACGAGTC GCTGACCCTC ACCCGCGAGC AGTACGTCAC CTACATGGAG
CGGCTCGGCG CCGTCGCCGC GGCCCACGGC ACCAAGGTGG TCTTCTGGCA GGAGGCGGCG
GGTGCCGCCC TCCCCCCGCA GACACGCCTG CAGTACTGGA CCTCGCAGTT CGAGACCGGC
CACATGGGGA AGGTCGCGCG CGAGCAGGAC GTCCAGTTCG TCGCGTCGCC CGGCAACCGC
GCCTACCTCG ACCAGAAGTA CACGGCCGAC TTCCCGCTCG GCCTGGACTG GGCGGCGCTC
ATCGACGTCG AGGACGCCTA CGACTGGGAC CCCGTCGCCG AGCTCCCCGA CATCCCCGCG
GAGTCGGTGG TCGGCGTCGA GGCCTGCCTC TGGACGGAGA CGCCGCGGTC CTTCGACGAC
CTCACCATGC TCACCCTGCC GCGGCTGCCC GCCATCGCGT CCGTCGCCTG GGGCTCCCCC
AAGGACCTCG GCGCCTTCCG CACGGCGCTC GCCCAGCACG GGCGGTGGTG GGACGAGGAC
GGTCTCGTGT TCTACCGGTC GACGCAGGTC GACTGGGACT GA
 
Protein sequence
MTLPLIPAPQ TIATTDATTT PLTAAHVDSL AAALEPWAPR ASAAARRLLT RGVTADAPTP 
TVVVDARLDP SLAAEGYTLD LAPEAWTLTA ADEAGAFWAV QSLAQMVRDG GVPAVTLSDA
PTYPVRGMML DIARFYFGPA DIRRVIDLAA SYRLNQLHLH LSDDQGWRLE IPSRPLLTKL
SSAQDVAGGE GGSLTLADYH ELQQYALDRH VVIVPEVDLP GHTHAAQVAY PEISPDGQER
EPYTGTEVGF SSLHLTSDEA WAFVDDVVAT LAEHTLGEYI HLGGDESLTL TREQYVTYME
RLGAVAAAHG TKVVFWQEAA GAALPPQTRL QYWTSQFETG HMGKVAREQD VQFVASPGNR
AYLDQKYTAD FPLGLDWAAL IDVEDAYDWD PVAELPDIPA ESVVGVEACL WTETPRSFDD
LTMLTLPRLP AIASVAWGSP KDLGAFRTAL AQHGRWWDED GLVFYRSTQV DWD